RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 ZFP37Q9Y6Q3 630 aaPredicted RBP16.43■□□□□ 0.22
UBE2F-219ENST00000455999 TPRP12270 2363 aaKnown RBP16.43■□□□□ 0.22
UBE2F-219ENST00000455999 NCOR2Q9Y618 2525 aa16.43■□□□□ 0.22
UBE2F-219ENST00000455999 STK36Q9NRP7 1315 aa16.43■□□□□ 0.22
UBE2F-219ENST00000455999 ZMYM2Q9UBW7 1377 aa16.42■□□□□ 0.22
UBE2F-219ENST00000455999 CTDNEP1O95476 244 aa16.42■□□□□ 0.22
UBE2F-219ENST00000455999 PUM1Q14671 1186 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBE2F-219ENST00000455999 UBXN2BQ14CS0 331 aa16.42■□□□□ 0.22
UBE2F-219ENST00000455999 NAB2Q15742 525 aa16.42■□□□□ 0.22
UBE2F-219ENST00000455999 MLF2Q15773 248 aaPredicted RBP16.42■□□□□ 0.22
UBE2F-219ENST00000455999 SLC44A4Q53GD3 710 aa16.42■□□□□ 0.22
UBE2F-219ENST00000455999 LIN9Q5TKA1 542 aa16.42■□□□□ 0.22
UBE2F-219ENST00000455999 TNFRSF25Q93038 417 aa16.42■□□□□ 0.22
UBE2F-219ENST00000455999 SHDQ96IW2 340 aa16.42■□□□□ 0.22
UBE2F-219ENST00000455999 CCDC43Q96MW1 224 aaKnown RBP16.42■□□□□ 0.22
UBE2F-219ENST00000455999 DDX23Q9BUQ8 820 aaKnown RBP16.42■□□□□ 0.22
UBE2F-219ENST00000455999 TM6SF1Q9BZW5 370 aa16.42■□□□□ 0.22
UBE2F-219ENST00000455999 TTC12Q9H892 705 aaPredicted RBP16.42■□□□□ 0.22
UBE2F-219ENST00000455999 SPATA6Q9NWH7 488 aaPredicted RBP16.42■□□□□ 0.22
UBE2F-219ENST00000455999 SNTG2Q9NY99 539 aa16.42■□□□□ 0.22
UBE2F-219ENST00000455999 PCDHA12Q9UN75 941 aa16.42■□□□□ 0.22
UBE2F-219ENST00000455999 KINO60870 393 aaKnown RBP16.41■□□□□ 0.22
UBE2F-219ENST00000455999 EDN1P05305 212 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 HNRNPA1P09651 372 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBE2F-219ENST00000455999 XBP1P17861 261 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 TXKP42681 527 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 CALCRLQ16602 461 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 POTEHQ6S545 545 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 SLC7A14Q8TBB6 771 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 ING5Q8WYH8 240 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 PDZD7Q9H5P4 517 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 DLL3Q9NYJ7 618 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 DNMT3BQ9UBC3 853 aaKnown RBP16.41■□□□□ 0.22
UBE2F-219ENST00000455999 TPCN1Q9ULQ1 816 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 ATG2BQ96BY7 2078 aa16.41■□□□□ 0.22
UBE2F-219ENST00000455999 FRYLO94915 3013 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 FAM170BA6NMN3 283 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 CDKL5O76039 1030 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 RECQL4O94761 1208 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 THP07101 528 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 OR1D2P34982 312 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 CSTF1Q05048 431 aaKnown RBP16.4■□□□□ 0.22
UBE2F-219ENST00000455999 RSPO4Q2I0M5 234 aaPredicted RBP16.4■□□□□ 0.22
UBE2F-219ENST00000455999 AXDND1Q5T1B0 1012 aaPredicted RBP16.4■□□□□ 0.22
UBE2F-219ENST00000455999 RSPO2Q6UXX9 243 aaPredicted RBP16.4■□□□□ 0.22
UBE2F-219ENST00000455999 MTSS1LQ765P7 747 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 NOSTRINQ8IVI9 506 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 NPAS3Q8IXF0 933 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 BSNDQ8WZ55 320 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 BCO2Q9BYV7 579 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 FZD8Q9H461 694 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 LTB4R2Q9NPC1 389 aa16.4■□□□□ 0.22
UBE2F-219ENST00000455999 ORC3Q9UBD5 711 aaPredicted RBP16.4■□□□□ 0.22
UBE2F-219ENST00000455999 LAMTOR5O43504 91 aa16.39■□□□□ 0.21
UBE2F-219ENST00000455999 PFKFB2O60825 505 aa16.39■□□□□ 0.21
UBE2F-219ENST00000455999 SPATA31C1P0DKV0 1188 aa16.39■□□□□ 0.21
UBE2F-219ENST00000455999 FDPSP14324 419 aaKnown RBP16.39■□□□□ 0.21
UBE2F-219ENST00000455999 LIG1P18858 919 aa16.39■□□□□ 0.21
UBE2F-219ENST00000455999 HOXA9P31269 272 aa16.39■□□□□ 0.21
UBE2F-219ENST00000455999 KRT2P35908 639 aa16.39■□□□□ 0.21
UBE2F-219ENST00000455999 PRKCQQ04759 706 aa16.39■□□□□ 0.21
UBE2F-219ENST00000455999 EEF1DP3Q658K8 133 aa16.39■□□□□ 0.21
UBE2F-219ENST00000455999 CDCA2Q69YH5 1023 aaPredicted RBP16.39■□□□□ 0.21
UBE2F-219ENST00000455999 TSSK4Q6SA08 328 aa16.39■□□□□ 0.21
UBE2F-219ENST00000455999 PRIMPOLQ96LW4 560 aa16.39■□□□□ 0.21
UBE2F-219ENST00000455999 PLA2G2FQ9BZM2 168 aa16.39■□□□□ 0.21
UBE2F-219ENST00000455999 PRMT7Q9NVM4 692 aaPredicted RBP16.39■□□□□ 0.21
UBE2F-219ENST00000455999 SPAG17Q6Q759 2223 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 XYLBO75191 536 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 TARSP26639 723 aaKnown RBP16.38■□□□□ 0.21
UBE2F-219ENST00000455999 FOSBP53539 338 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 RAB33AQ14088 237 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 FAM187BQ17R55 369 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 TMEM132AQ24JP5 1023 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 SLC5A9Q2M3M2 681 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 ZNF528Q3MIS6 628 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 PABPC1LQ4VXU2 614 aaKnown RBP16.38■□□□□ 0.21
UBE2F-219ENST00000455999 GLRA4Q5JXX5 417 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 VARS2Q5ST30 1063 aaKnown RBP16.38■□□□□ 0.21
UBE2F-219ENST00000455999 CD300LGQ6UXG3 332 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 MCRS1Q96EZ8 462 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 POLD4Q9HCU8 107 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 NCDNQ9UBB6 729 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 FBXO4Q9UKT5 387 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 GDAQ9Y2T3 454 aa16.38■□□□□ 0.21
UBE2F-219ENST00000455999 ZNF638Q14966 1978 aaKnown RBP16.37■□□□□ 0.21
UBE2F-219ENST00000455999 I3L4J1 428 aa16.37■□□□□ 0.21
UBE2F-219ENST00000455999 N4BP3O15049 544 aa16.37■□□□□ 0.21
UBE2F-219ENST00000455999 MED24O75448 989 aa16.37■□□□□ 0.21
UBE2F-219ENST00000455999 ATP2B1P20020 1258 aa16.37■□□□□ 0.21
UBE2F-219ENST00000455999 FGFR3P22607 806 aa16.37■□□□□ 0.21
UBE2F-219ENST00000455999 ELAVL2Q12926 359 aaKnown RBP16.37■□□□□ 0.21
UBE2F-219ENST00000455999 PRPF4BQ13523 1007 aaKnown RBP16.37■□□□□ 0.21
UBE2F-219ENST00000455999 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.37■□□□□ 0.21
UBE2F-219ENST00000455999 TPRG1Q6ZUI0 275 aa16.37■□□□□ 0.21
UBE2F-219ENST00000455999 ZBTB8OSQ8IWT0 167 aa16.37■□□□□ 0.21
UBE2F-219ENST00000455999 MTMR9Q96QG7 549 aa16.37■□□□□ 0.21
UBE2F-219ENST00000455999 OSBPL6Q9BZF3 934 aa16.37■□□□□ 0.21
UBE2F-219ENST00000455999 TMEM60Q9H2L4 133 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms