RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ATP6V1G3Q96LB4 118 aa16.17■□□□□ 0.18
LDLR-202ENST00000455727 CEP89Q96ST8 783 aa16.17■□□□□ 0.18
LDLR-202ENST00000455727 ERVK-5Q9HDB9 667 aa16.17■□□□□ 0.18
LDLR-202ENST00000455727 AGO2Q9UKV8 859 aaKnown RBP16.17■□□□□ 0.18
LDLR-202ENST00000455727 PHF2O75151 1096 aa16.17■□□□□ 0.18
LDLR-202ENST00000455727 C4BPAP04003 597 aaKnown RBP16.17■□□□□ 0.18
LDLR-202ENST00000455727 RFC5P40937 340 aa16.17■□□□□ 0.18
LDLR-202ENST00000455727 ALDH5A1P51649 535 aaPredicted RBP16.17■□□□□ 0.18
LDLR-202ENST00000455727 BPIFB4P59827 614 aa16.17■□□□□ 0.18
LDLR-202ENST00000455727 NAA35Q5VZE5 725 aa16.17■□□□□ 0.18
LDLR-202ENST00000455727 FNBP1Q96RU3 617 aa16.17■□□□□ 0.18
LDLR-202ENST00000455727 PCYOX1Q9UHG3 505 aa16.17■□□□□ 0.18
LDLR-202ENST00000455727 PCDHB2Q9Y5E7 798 aa16.17■□□□□ 0.18
LDLR-202ENST00000455727 SNCAIPQ9Y6H5 919 aa16.17■□□□□ 0.18
LDLR-202ENST00000455727 K7ERI5 159 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 UNGP13051 313 aaPredicted RBP16.16■□□□□ 0.18
LDLR-202ENST00000455727 GLRA2P23416 452 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 EDNRBP24530 442 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 CNTN2Q02246 1040 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 WDR44Q5JSH3 913 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 SEL1L2Q5TEA6 688 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 TMC3Q7Z5M5 1100 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 ZNF526Q8TF50 670 aaPredicted RBP16.16■□□□□ 0.18
LDLR-202ENST00000455727 ATP8B4Q8TF62 1192 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 SLC7A3Q8WY07 619 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 TMEM143Q96AN5 459 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 TMEM134Q9H6X4 195 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 TMBIM4Q9HC24 238 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 RASAL2Q9UJF2 1139 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 GOLGA6L10A6NI86 522 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 TMEM110-MUSTN1A8MSY1 372 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 KRT5P13647 590 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 GBP1P32455 592 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 MARCKSL1P49006 195 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 TARBP2Q15633 366 aaKnown RBP16.16■□□□□ 0.18
LDLR-202ENST00000455727 CYP1B1Q16678 543 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 DEPTORQ8TB45 409 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 ASAP3Q8TDY4 903 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 RUNDC3BQ96NL0 473 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 PI4K2AQ9BTU6 479 aa16.16■□□□□ 0.18
LDLR-202ENST00000455727 AVENQ9NQS1 362 aaPredicted RBP16.16■□□□□ 0.18
LDLR-202ENST00000455727 PODXLO00592 558 aa16.15■□□□□ 0.18
LDLR-202ENST00000455727 EIF3HO15372 352 aaKnown RBP eCLIP16.15■□□□□ 0.18
LDLR-202ENST00000455727 ATMINO43313 823 aaPredicted RBP16.15■□□□□ 0.18
LDLR-202ENST00000455727 MYBL1P10243 752 aa16.15■□□□□ 0.18
LDLR-202ENST00000455727 TGFB3P10600 412 aa16.15■□□□□ 0.18
LDLR-202ENST00000455727 CEP85LQ5SZL2 805 aa16.15■□□□□ 0.18
LDLR-202ENST00000455727 CRELD2Q6UXH1 353 aaPredicted RBP16.15■□□□□ 0.18
LDLR-202ENST00000455727 RUFY4Q6ZNE9 571 aa16.15■□□□□ 0.18
LDLR-202ENST00000455727 PRELID2Q8N945 189 aa16.15■□□□□ 0.18
LDLR-202ENST00000455727 TRIM11Q96F44 468 aa16.15■□□□□ 0.18
LDLR-202ENST00000455727 TRIM51Q9BSJ1 452 aa16.15■□□□□ 0.18
LDLR-202ENST00000455727 NRBP2Q9NSY0 501 aa16.15■□□□□ 0.18
LDLR-202ENST00000455727 CNOT8Q9UFF9 292 aaKnown RBP16.15■□□□□ 0.18
LDLR-202ENST00000455727 PAPPA2Q9BXP8 1791 aa16.15■□□□□ 0.18
LDLR-202ENST00000455727 GSTTP1A0A1W2PQM5 241 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 FAM170AA1A519 330 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 TULP1O00294 542 aaPredicted RBP16.14■□□□□ 0.18
LDLR-202ENST00000455727 SPOPO43791 374 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 SORBS3O60504 671 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 PPFIA2O75334 1257 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 ERLIN2O94905 339 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 HLA-DRAP01903 254 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 MYZAPP0CAP1 466 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 PYGMP11217 842 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 TNNI1P19237 187 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 FLT3P36888 993 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 PTGIRP43119 386 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 NLRP11P59045 1033 aaKnown RBP16.14■□□□□ 0.18
LDLR-202ENST00000455727 FSTL1Q12841 308 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 VGLL4Q14135 290 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 KCTD16Q68DU8 428 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 SEPT14Q6ZU15 432 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 ADAT2Q7Z6V5 191 aaKnown RBP16.14■□□□□ 0.18
LDLR-202ENST00000455727 JAMLQ86YT9 394 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 FMO2Q99518 471 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 TXLNGYQ9BZA5 131 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 DPH5Q9H2P9 285 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 ZDHHC18Q9NUE0 388 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 MTUS1Q9ULD2 1270 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 PPME1Q9Y570 386 aa16.14■□□□□ 0.18
LDLR-202ENST00000455727 GRIN2DO15399 1336 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 A0A0B4J269 797 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 FARP2O94887 1054 aaPredicted RBP16.14■□□□□ 0.17
LDLR-202ENST00000455727 UBA1P22314 1058 aaKnown RBP16.14■□□□□ 0.17
LDLR-202ENST00000455727 RWDD2BP57060 319 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 GNGT1P63211 74 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 BIRC3Q13489 604 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 NEDD9Q14511 834 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 TREML2Q5T2D2 321 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 TDRD10Q5VZ19 366 aaKnown RBP16.14■□□□□ 0.17
LDLR-202ENST00000455727 AADACL2Q6P093 401 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 SLC13A5Q86YT5 568 aaPredicted RBP16.14■□□□□ 0.17
LDLR-202ENST00000455727 SH2D3CQ8N5H7 860 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 GLG1Q92896 1179 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 HAPLN2Q9GZV7 340 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 BTBD7Q9P203 1132 aa16.14■□□□□ 0.17
LDLR-202ENST00000455727 CHORDC1Q9UHD1 332 aaPredicted RBP16.14■□□□□ 0.17
LDLR-202ENST00000455727 LRRIQ4A6NIV6 560 aa16.13■□□□□ 0.17
LDLR-202ENST00000455727 NR1D1P20393 614 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms