RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 FSCN1Q16658 493 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 DEFB115Q30KQ5 88 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 NFRKBQ6P4R8 1299 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 H2AFVQ71UI9 128 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 RHOT2Q8IXI1 618 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 PCSK9Q8NBP7 692 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 VCPIP1Q96JH7 1222 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 TSEN34Q9BSV6 310 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 IFT122Q9HBG6 1241 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 PCDHB2Q9Y5E7 798 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 PCDHGC5Q9Y5F6 944 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 NCANO14594 1321 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 ANKRD62A6NC57 917 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 DYNC1LI2O43237 492 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 XPOTO43592 962 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 MTA2O94776 668 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 TRIM49P0CI25 452 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 TRIM49CP0CI26 452 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 SRGAP2CP0DJJ0 459 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 TNFAIP3P21580 790 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 MARK3P27448 753 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 GRM5P41594 1212 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 CRYBB1P53674 252 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 SP3Q02447 781 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 PTK2Q05397 1052 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 ZNF569Q5MCW4 686 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 MARCH8Q5T0T0 291 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 PHLDB3Q6NSJ2 640 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 ALKBH5Q6P6C2 394 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 ZNF572Q7Z3I7 529 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 KIAA0319LQ8IZA0 1049 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 METTL13Q8N6R0 699 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 ACRBPQ8NEB7 543 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 HELQQ8TDG4 1101 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 ANKRD36BP1Q96IX9 119 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 AGPAT1Q99943 283 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 DESI2Q9BSY9 194 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 KIFC3Q9BVG8 833 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 ISCUQ9H1K1 167 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 RPF1Q9H9Y2 349 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 CYP3A43Q9HB55 503 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 UBE2TQ9NPD8 197 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 CHST12Q9NRB3 414 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 AKT3Q9Y243 479 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 TELO2Q9Y4R8 837 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 MRFAP1Q9Y605 127 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 MYH10P35580 1976 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 C17orf102A2RUQ5 167 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 INO80B-WBP1J3KQ70 363 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 RIOK3O14730 519 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 RTN2O75298 545 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 ERLIN2O94905 339 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 SMIM10L2AP0DMW4 78 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 SMIM10L2BP0DMW5 78 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 RARBP10826 455 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 TNNI1P19237 187 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 MCM3P25205 808 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 MATR3P43243 847 aaKnown RBP eCLIP7.36□□□□□ -1.238e-7■■■■■ 31.9
ECHDC1-210ENST00000454859 PSMC4P43686 418 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 APLP1P51693 650 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 AMHR2Q16671 573 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 ZNF568Q3ZCX4 644 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 NOTUMQ6P988 496 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 TRIM50Q86XT4 487 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 PLEKHO2Q8TD55 490 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 RSPH1Q8WYR4 309 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 SAAL1Q96ER3 474 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 SH2D3AQ9BRG2 576 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 TCHPQ9BT92 498 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 ZNF518BQ9C0D4 1074 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 GPR88Q9GZN0 384 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 ADAMTS10Q9H324 1103 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 POLD4Q9HCU8 107 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 LZTFL1Q9NQ48 299 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 ITGA11Q9UKX5 1188 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 KIAA1257Q9ULG3 409 aa7.36□□□□□ -1.23
ECHDC1-210ENST00000454859 LSM8O95777 96 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 ASS1P00966 412 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 HLA-DRAP01903 254 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 ACTN1P12814 892 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 DARSP14868 501 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 PIK3CAP42336 1068 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 PDE6CP51160 858 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 NLRP11P59045 1033 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 DLG4P78352 724 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 PURAQ00577 322 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 CDR2Q01850 454 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 PPP2R5EQ16537 467 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 PTPN21Q16825 1174 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 KIAA0753Q2KHM9 967 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 MAP3K21Q5TCX8 1036 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 TRAPPC11Q7Z392 1133 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 ZNF571Q7Z3V5 609 aaPredicted RBP7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 HACE1Q8IYU2 909 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 PDCL2Q8N4E4 241 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 USP38Q8NB14 1042 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 RDH13Q8NBN7 331 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 KAT2BQ92831 832 aa7.35□□□□□ -1.23
ECHDC1-210ENST00000454859 CCDC94Q9BW85 323 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms