RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-240	ENST00000454612	UGCG	Q16739	394 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	TKFC	Q3LXA3	575 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	MICALL2	Q8IY33	904 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	CCDC89	Q8N998	374 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	FBXL13	Q8NEE6	735 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	HSPH1	Q92598	858 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	ZBTB10	Q96DT7	871 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	MAK16	Q9BXY0	300 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	MRPL42	Q9Y6G3	142 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	TLR3	O15455	904 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	SETSIP	P0DME0	302 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	BASP1	P80723	227 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	CUL1	Q13616	776 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	CCDC6	Q16204	474 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	ATP13A4	Q4VNC1	1196 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	GLE1	Q53GS7	698 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	CYP4A22	Q5TCH4	519 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	RFX8	Q6ZV50	586 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	PPP1R14C	Q8TAE6	165 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	ARHGEF2	Q92974	986 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	ATP6V0A1	Q93050	837 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	EDEM3	Q9BZQ6	932 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	VIPAS39	Q9H9C1	493 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	HAUS2	Q9NVX0	235 aa		11.92	□□□□□ -0.5
DDR1-240	ENST00000454612	KIAA1551	Q9HCM1	1747 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	CCDC188	H7C350	402 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	EDIL3	O43854	480 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	RRM1	P23921	792 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	FAM160B2	Q86V87	743 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	SIAH1	Q8IUQ4	282 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	C4orf33	Q8N1A6	199 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	CYFIP2	Q96F07	1278 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	DDX23	Q9BUQ8	820 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	IQCG	Q9H095	443 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	AIPL1	Q9NZN9	384 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	SNED1	Q8TER0	1413 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	ROBO3	Q96MS0	1386 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	YDJC	A8MPS7	323 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	EGFR	P00533	1210 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	CAP2	P40123	477 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	MXRA7	P84157	204 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	HHAT	Q5VTY9	493 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	RHPN2	Q8IUC4	686 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	SUGP1	Q8IWZ8	645 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	FAM151A	Q8WW52	585 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	NSRP1	Q9H0G5	558 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	DEFB129	Q9H1M3	183 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	RAB20	Q9NX57	234 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	FEM1B	Q9UK73	627 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612		H0Y3Z8	333 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	SLC8A1	P32418	973 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	NPTX2	P47972	431 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	PSMC5	P62195	406 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	TMEM62	Q0P6H9	643 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	C1orf186	Q6ZWK4	172 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	TRIM50	Q86XT4	487 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	CCDC197	Q8NCU1	140 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	SLC5A5	Q92911	643 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	ISCU	Q9H1K1	167 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	TUFT1	Q9NNX1	390 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	CTNNAL1	Q9UBT7	734 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	HERC5	Q9UII4	1024 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	PCDHA10	Q9Y5I2	948 aa		11.91	□□□□□ -0.5
DDR1-240	ENST00000454612	RARRES1	P49788	294 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	IFRD2	Q12894	506 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	MYO1E	Q12965	1108 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	ANGEL2	Q5VTE6	544 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	NT5DC3	Q86UY8	548 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	ZC3H18	Q86VM9	953 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	KCNV2	Q8TDN2	545 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	FBF1	Q8TES7	1133 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	ERP44	Q9BS26	406 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	SAE1	Q9UBE0	346 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	CNOT7	Q9UIV1	285 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	DCTN4	Q9UJW0	460 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	INTU	Q9ULD6	942 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	RGPD4	Q7Z3J3	1758 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	DLEC1	Q9Y238	1755 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	ORC2	Q13416	577 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	SV2A	Q7L0J3	742 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	NOP9	Q86U38	636 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	RHOT2	Q8IXI1	618 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	RSAD2	Q8WXG1	361 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	SH3GL3	Q99963	347 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	FAM167B	Q9BTA0	163 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	RBAK	Q9NYW8	714 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	COL20A1	Q9P218	1284 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	TMX2	Q9Y320	296 aa		11.9	□□□□□ -0.5
DDR1-240	ENST00000454612	WNT10B	O00744	389 aa		11.9	□□□□□ -0.51
DDR1-240	ENST00000454612	ATP2A1	O14983	1001 aa		11.9	□□□□□ -0.51
DDR1-240	ENST00000454612	PLS3	P13797	630 aa		11.9	□□□□□ -0.51
DDR1-240	ENST00000454612	BRAF	P15056	766 aa		11.9	□□□□□ -0.51
DDR1-240	ENST00000454612	GNA15	P30679	374 aa		11.9	□□□□□ -0.51
DDR1-240	ENST00000454612	POLE2	P56282	527 aa		11.9	□□□□□ -0.51
DDR1-240	ENST00000454612	IRX1	P78414	480 aa	Predicted RBP	11.9	□□□□□ -0.51
DDR1-240	ENST00000454612	TNFAIP1	Q13829	316 aa		11.9	□□□□□ -0.51
DDR1-240	ENST00000454612	ZRSR2	Q15696	482 aa	Known RBP	11.9	□□□□□ -0.51
DDR1-240	ENST00000454612	PALM2	Q8IXS6	379 aa		11.9	□□□□□ -0.51

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