RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 LGR6Q9HBX8 967 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 PCDH18Q9HCL0 1135 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 EPB41L4AQ9HCS5 686 aaPredicted RBP3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 ZDHHC18Q9NUE0 388 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 PANK4Q9NVE7 773 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 CUEDC1Q9NWM3 386 aaPredicted RBP3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 NMRK1Q9NWW6 199 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 ZDHHC7Q9NXF8 308 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 BARHL2Q9NY43 387 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 KCND2Q9NZV8 630 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 UVRAGQ9P2Y5 699 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 SEL1LQ9UBV2 794 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 AMACRQ9UHK6 382 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 ZFP69BQ9UJL9 534 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 PPP1R9AQ9ULJ8 1098 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 PADI4Q9UM07 663 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 EXOC7Q9UPT5 735 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 DMTF1Q9Y222 760 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 L3MBTL1Q9Y468 752 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 PPME1Q9Y570 386 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 CD2APQ9Y5K6 639 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 CICQ96RK0 1608 aaPredicted RBP3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 NFASCO94856 1347 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 FLT1P17948 1338 aa3.68□□□□□ -1.82
AC006539.3-201ENST00000454258 RGPD2P0DJD1 1756 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 KCPQ6ZWJ8 1503 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 A0A087X0T9 212 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L3A6NCW0 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L4A6NCW7 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 FAM196BA6NMK8 535 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 GSG1L2A8MUP6 293 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L15C9J2P7 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 RASA4BC9J798 803 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L10C9JJH3 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L13C9JLJ4 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L12C9JPN9 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L11C9JVI0 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L21D6R901 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L18D6R9N7 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L22D6RA61 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L17D6RBQ6 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L19D6RCP7 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L20D6RJB6 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 I3L4J1 428 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 RNF225M0QZC1 329 aaPredicted RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 ZNF701M0R085 212 aaPredicted RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 MATN2O00339 956 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 TRAF5O00463 557 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 DDX3XO00571 662 aaKnown RBP eCLIP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 AREL1O15033 823 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 LSM1O15116 133 aaKnown RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 EIF3DO15371 548 aaKnown RBP eCLIP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 RASA4O43374 803 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 NCK2O43639 380 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 CYTH3O43739 400 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 AP1G1O43747 822 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 EXOC3O60645 756 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 PDE8AO60658 829 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 TBCAO75347 108 aaKnown RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 DKK1O94907 266 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 TNFAIP8O95379 198 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 TTC4O95801 387 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 TFRCP02786 760 aaKnown RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 ANXA1P04083 346 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 CFHP08603 1231 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 FAM228BP0C875 321 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 FAM200BP0CF97 657 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 HARSP12081 509 aaKnown RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 UCHL3P15374 230 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 RXRAP19793 462 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 CTNNA2P26232 953 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 TPP2P29144 1249 aaPredicted RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 TTKP33981 857 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 IGHMBP2P38935 993 aaKnown RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 RPL5P46777 297 aaKnown RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 IFNAR2P48551 515 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 RAP1GDS1P52306 607 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 PLTPP55058 493 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 NUP107P57740 925 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 SESN3P58005 492 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 SNRPFP62306 86 aaKnown RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 POU5F1Q01860 360 aaKnown RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 ENPEPQ07075 957 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 RIPPLY1Q0D2K3 151 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 USP17L24Q0WX57 530 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 KCNMA1Q12791 1236 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 LSAMPQ13449 338 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 TCIRG1Q13488 830 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 AUHQ13825 339 aaKnown RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 PTK6Q13882 451 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 COL9A3Q14050 684 aaPredicted RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 SLC29A2Q14542 456 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 RRP1BQ14684 758 aaKnown RBP3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 GRM4Q14833 912 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 MYBPC3Q14896 1274 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 RCN1Q15293 331 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 PKN1Q16512 942 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 CALCRLQ16602 461 aa3.67□□□□□ -1.82
AC006539.3-201ENST00000454258 NDUFA5Q16718 116 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms