RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 PPP1R10Q96QC0 940 aaKnown RBP11.81□□□□□ -0.52
LMCD1-205ENST00000454244 MAN1C1Q9NR34 630 aa11.81□□□□□ -0.52
LMCD1-205ENST00000454244 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.81□□□□□ -0.52
LMCD1-205ENST00000454244 BLOC1S4Q9NUP1 217 aa11.81□□□□□ -0.52
LMCD1-205ENST00000454244 KCNG1Q9UIX4 513 aa11.81□□□□□ -0.52
LMCD1-205ENST00000454244 NR2E1Q9Y466 385 aa11.81□□□□□ -0.52
LMCD1-205ENST00000454244 SMIM28A0A1B0GU29 152 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 C2CD4DB7Z1M9 353 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 ABLIM1O14639 778 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 SPATA31D3P0C874 917 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 MAPTP10636 758 aaKnown RBP11.8□□□□□ -0.52
LMCD1-205ENST00000454244 RPL17P18621 184 aaKnown RBP11.8□□□□□ -0.52
LMCD1-205ENST00000454244 PROZP22891 400 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 IGFBP6P24592 240 aaPredicted RBP11.8□□□□□ -0.52
LMCD1-205ENST00000454244 MARCKSP29966 332 aaPredicted RBP11.8□□□□□ -0.52
LMCD1-205ENST00000454244 ZXDAP98168 799 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 SPECC1Q5M775 1068 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 FAM171A1Q5VUB5 890 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 MPZL3Q6UWV2 235 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 SPATA31D4Q6ZUB0 917 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 CEP57Q86XR8 500 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 PALB2Q86YC2 1186 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 RAD54LQ92698 747 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 ACAP3Q96P50 834 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 REEP2Q9BRK0 252 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 TTPALQ9BTX7 342 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 CCSER1Q9C0I3 900 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 TOPORSQ9NS56 1045 aaPredicted RBP11.8□□□□□ -0.52
LMCD1-205ENST00000454244 FNIP2Q9P278 1114 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 LARSQ9P2J5 1176 aaKnown RBP11.8□□□□□ -0.52
LMCD1-205ENST00000454244 ANKFY1Q9P2R3 1169 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 ODF2LQ9ULJ1 636 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 MTMR6Q9Y217 621 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 HCN4Q9Y3Q4 1203 aa11.8□□□□□ -0.52
LMCD1-205ENST00000454244 H0YCG3 227 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 TOM1L1O75674 476 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 B3GAT3O94766 335 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 FAM13AO94988 1023 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 BRD1O95696 1058 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 KRT18P05783 430 aaKnown RBP11.79□□□□□ -0.52
LMCD1-205ENST00000454244 CLCNKBP51801 687 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 NCKAP1LP55160 1127 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 CREMQ03060 361 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 CEBPZQ03701 1054 aaKnown RBP11.79□□□□□ -0.52
LMCD1-205ENST00000454244 ELAVL2Q12926 359 aaKnown RBP11.79□□□□□ -0.52
LMCD1-205ENST00000454244 PTPN21Q16825 1174 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 SEZ6Q53EL9 994 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 XKR4Q5GH76 650 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 ELMSAN1Q6PJG2 1045 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 DCLRE1AQ6PJP8 1040 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 ZPBP2Q6X784 338 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 TRIM67Q6ZTA4 783 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 CCDC149Q6ZUS6 474 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 USP49Q70CQ1 688 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 HAUS6Q7Z4H7 955 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 MYCT1Q8N699 235 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 TDRD5Q8NAT2 981 aaKnown RBP11.79□□□□□ -0.52
LMCD1-205ENST00000454244 CMASQ8NFW8 434 aaPredicted RBP11.79□□□□□ -0.52
LMCD1-205ENST00000454244 PIK3R5Q8WYR1 880 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 BICD1Q96G01 975 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 EPSTI1Q96J88 318 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 SNX27Q96L92 541 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 ZHX3Q9H4I2 956 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 GOLGA2P5Q9HBQ8 144 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 DPP7Q9UHL4 492 aa11.79□□□□□ -0.52
LMCD1-205ENST00000454244 FBXO2Q9UK22 296 aaPredicted RBP11.79□□□□□ -0.52
LMCD1-205ENST00000454244 CCDC195A0A1B0GUA6 201 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 TMEM221A6NGB7 291 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 TMEM189-UBE2V1I3L0A0 370 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 K7ENM7 598 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 M0R296 226 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 TGM5O43548 720 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 STX6O43752 255 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 TBCAO75347 108 aaKnown RBP11.78□□□□□ -0.52
LMCD1-205ENST00000454244 RFPL2O75678 378 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 KCNE1P15382 129 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 MATR3P43243 847 aaKnown RBP eCLIP11.78□□□□□ -0.52
LMCD1-205ENST00000454244 SOX4Q06945 474 aaPredicted RBP11.78□□□□□ -0.52
LMCD1-205ENST00000454244 NOLC1Q14978 699 aaKnown RBP eCLIP11.78□□□□□ -0.52
LMCD1-205ENST00000454244 PSMD5Q16401 504 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 LILRA6Q6PI73 481 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 CD300LGQ6UXG3 332 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 ALKAL1Q6UXT8 129 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.78□□□□□ -0.52
LMCD1-205ENST00000454244 C15orf39Q6ZRI6 1047 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 HFE2Q6ZVN8 426 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 LNX1Q8TBB1 728 aaPredicted RBP11.78□□□□□ -0.52
LMCD1-205ENST00000454244 HDAC7Q8WUI4 952 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 LARP4BQ92615 738 aaKnown RBP11.78□□□□□ -0.52
LMCD1-205ENST00000454244 UROC1Q96N76 676 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 ZMAT2Q96NC0 199 aaKnown RBP11.78□□□□□ -0.52
LMCD1-205ENST00000454244 CLIC6Q96NY7 704 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 USP28Q96RU2 1077 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 PARVGQ9HBI0 331 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 SLC38A7Q9NVC3 462 aa11.78□□□□□ -0.52
LMCD1-205ENST00000454244 SRPRBQ9Y5M8 271 aaKnown RBP11.78□□□□□ -0.52
LMCD1-205ENST00000454244 I3L4J1 428 aa11.77□□□□□ -0.53
LMCD1-205ENST00000454244 CLDN3O15551 220 aa11.77□□□□□ -0.53
LMCD1-205ENST00000454244 MEFVO15553 781 aaPredicted RBP11.77□□□□□ -0.53
LMCD1-205ENST00000454244 ADAM12O43184 909 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms