RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 STRN3Q13033 797 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 RESTQ13127 1097 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 KARSQ15046 597 aaKnown RBP18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 PTPN21Q16825 1174 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 FAM171A1Q5VUB5 890 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 TRIM67Q6ZTA4 783 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 GPBP1Q86WP2 473 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 TMEM161BQ8NDZ6 487 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 RASSF8Q8NHQ8 419 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 GOLGA2P5Q9HBQ8 144 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 BLOC1S4Q9NUP1 217 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 TECTAO75443 2155 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 MYH11P35749 1972 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 TRIP11Q15643 1979 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 SMIM28A0A1B0GU29 152 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 CCDC195A0A1B0GUA6 201 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 TMEM221A6NGB7 291 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 M0R296 226 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 TGM5O43548 720 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 RFPL2O75678 378 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 MAPTP10636 758 aaKnown RBP18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 PROZP22891 400 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 LONP1P36776 959 aaKnown RBP18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 SMTNP53814 917 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 YARSP54577 528 aaKnown RBP18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 MCM6Q14566 821 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 SEZ6Q53EL9 994 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 SPECC1Q5M775 1068 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 MPZL3Q6UWV2 235 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 TDRD5Q8NAT2 981 aaKnown RBP18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 REEP2Q9BRK0 252 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 TTPALQ9BTX7 342 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 KCND2Q9NZV8 630 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 FNIP2Q9P278 1114 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 ANKFY1Q9P2R3 1169 aa18.03■□□□□ 0.48
NCKIPSD-208ENST00000454134 C2orf16Q68DN1 1984 aa18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 SLC26A4O43511 780 aa18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 B3GAT3O94766 335 aa18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 MCF2P10911 925 aa18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 MARCKSP29966 332 aaPredicted RBP18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 CLCNKBP51801 687 aa18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 CEBPZQ03701 1054 aaKnown RBP18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 SOX4Q06945 474 aaPredicted RBP18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 PTPAQ15257 358 aa18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 USP49Q70CQ1 688 aa18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 KREMEN2Q8NCW0 462 aa18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 ZMAT2Q96NC0 199 aaKnown RBP18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 ACAP3Q96P50 834 aa18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 TOPORSQ9NS56 1045 aaPredicted RBP18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 LIMD1Q9UGP4 676 aa18.02■□□□□ 0.48
NCKIPSD-208ENST00000454134 DENND4AQ7Z401 1863 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 I3L4J1 428 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 K7ELQ4 463 aaPredicted RBP18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 MEFVO15553 781 aaPredicted RBP18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 BRD1O95696 1058 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 ASGR2P07307 311 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 XKR4Q5GH76 650 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 LILRA6Q6PI73 481 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 CD300LGQ6UXG3 332 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 ALKAL1Q6UXT8 129 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 C15orf39Q6ZRI6 1047 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 CCDC149Q6ZUS6 474 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 GPR65Q8IYL9 337 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 C3orf58Q8NDZ4 430 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 CMASQ8NFW8 434 aaPredicted RBP18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 LNX1Q8TBB1 728 aaPredicted RBP18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 PIK3R5Q8WYR1 880 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 RAD54LQ92698 747 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 EPSTI1Q96J88 318 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 SNX27Q96L92 541 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 SMOC2Q9H3U7 446 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 ZHX3Q9H4I2 956 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 LARSQ9P2J5 1176 aaKnown RBP18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 KCNG1Q9UIX4 513 aa18.01■□□□□ 0.47
NCKIPSD-208ENST00000454134 ADAM12O43184 909 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 TOM1L1O75674 476 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 NCKAP1LP55160 1127 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 CREMQ03060 361 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 SIGLEC14Q08ET2 396 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 ELAVL2Q12926 359 aaKnown RBP18■□□□□ 0.47
NCKIPSD-208ENST00000454134 NOLC1Q14978 699 aaKnown RBP eCLIP18■□□□□ 0.47
NCKIPSD-208ENST00000454134 PSMD5Q16401 504 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 UPP1Q16831 310 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 ELMSAN1Q6PJG2 1045 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 DCLRE1AQ6PJP8 1040 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 HAUS6Q7Z4H7 955 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 ZDHHC14Q8IZN3 488 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 MYCT1Q8N699 235 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 SMG7Q92540 1137 aaKnown RBP18■□□□□ 0.47
NCKIPSD-208ENST00000454134 PBXIP1Q96AQ6 731 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 C18orf25Q96B23 403 aaPredicted RBP18■□□□□ 0.47
NCKIPSD-208ENST00000454134 BICD1Q96G01 975 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 INTS4Q96HW7 963 aaKnown RBP18■□□□□ 0.47
NCKIPSD-208ENST00000454134 CLIC6Q96NY7 704 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 CLSTN3Q9BQT9 956 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 CCSER1Q9C0I3 900 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 HAPLN2Q9GZV7 340 aa18■□□□□ 0.47
NCKIPSD-208ENST00000454134 DAXXQ9UER7 740 aaPredicted RBP18■□□□□ 0.47
NCKIPSD-208ENST00000454134 DPP7Q9UHL4 492 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms