RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 CLDN23Q96B33 292 aa15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 AIFM3Q96NN9 605 aa15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 EIF2AK1Q9BQI3 630 aaKnown RBP15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 C2orf40Q9H1Z8 148 aa15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 EPC1Q9H2F5 836 aa15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 BRMS1Q9HCU9 246 aa15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 AVENQ9NQS1 362 aaPredicted RBP15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 ZSCAN32Q9NX65 697 aa15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 NCDNQ9UBB6 729 aa15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 PARP2Q9UGN5 583 aa15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 KCNJ14Q9UNX9 436 aa15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 PATJQ8NI35 1801 aa15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 MYH15Q9Y2K3 1946 aa15.82■□□□□ 0.12
LYSMD3-202ENST00000453259 POTEMA6NI47 508 aa15.81■□□□□ 0.12
LYSMD3-202ENST00000453259 TBC1D4O60343 1298 aa15.81■□□□□ 0.12
LYSMD3-202ENST00000453259 DNAH14Q0VDD8 3507 aa15.81■□□□□ 0.12
LYSMD3-202ENST00000453259 SNW1Q13573 536 aaKnown RBP15.81■□□□□ 0.12
LYSMD3-202ENST00000453259 PRSS55Q6UWB4 352 aaPredicted RBP15.81■□□□□ 0.12
LYSMD3-202ENST00000453259 MAMSTRQ6ZN01 415 aa15.81■□□□□ 0.12
LYSMD3-202ENST00000453259 GLYCTKQ8IVS8 523 aa15.81■□□□□ 0.12
LYSMD3-202ENST00000453259 ZBTB8OSQ8IWT0 167 aa15.81■□□□□ 0.12
LYSMD3-202ENST00000453259 ADPGKQ9BRR6 497 aa15.81■□□□□ 0.12
LYSMD3-202ENST00000453259 FZD8Q9H461 694 aa15.81■□□□□ 0.12
LYSMD3-202ENST00000453259 LTB4R2Q9NPC1 389 aa15.81■□□□□ 0.12
LYSMD3-202ENST00000453259 FAM170BA6NMN3 283 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 ZBTB39O15060 712 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 B4GALT5O43286 388 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 TRAPPC3O43617 180 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 LILRB5O75023 590 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 KIF4AO95239 1232 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 MYBP10242 640 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 PPP2R5DQ14738 602 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 UBXN2BQ14CS0 331 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 PABPC1LQ4VXU2 614 aaKnown RBP15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 AXDND1Q5T1B0 1012 aaPredicted RBP15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 ZNF852Q6ZMS4 543 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 APBB1IPQ7Z5R6 666 aaPredicted RBP15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 NPAS3Q8IXF0 933 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 SLC7A14Q8TBB6 771 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 DNASE1L2Q92874 299 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 UROC1Q96N76 676 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 RPP25Q9BUL9 199 aaKnown RBP15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 POLR3FQ9H1D9 316 aaPredicted RBP15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 MTRRQ9UBK8 725 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 BACE2Q9Y5Z0 518 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 CACNA1IQ9P0X4 2223 aa15.8■□□□□ 0.12
LYSMD3-202ENST00000453259 NCOR2Q9Y618 2525 aa15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 LRRIQ4A6NIV6 560 aa15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 PTGESO14684 152 aa15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 FGFR3P22607 806 aa15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 NRLP54845 237 aa15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 CALCRLQ16602 461 aa15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 MAPK6Q16659 721 aa15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 RSPO4Q2I0M5 234 aaPredicted RBP15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 ANKS3Q6ZW76 656 aa15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 TTC12Q9H892 705 aaPredicted RBP15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 PRMT8Q9NR22 394 aaPredicted RBP15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 KLK14Q9P0G3 267 aa15.79■□□□□ 0.12
LYSMD3-202ENST00000453259 CASTOR2A6NHX0 329 aa15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 CCL16O15467 120 aa15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 MICAL2O94851 1124 aa15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 KRT2P35908 639 aa15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 CSTF1Q05048 431 aaKnown RBP15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 PRPF4BQ13523 1007 aaKnown RBP15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 NAB2Q15742 525 aa15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 DCAF4L1Q3SXM0 396 aa15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 CEP57Q86XR8 500 aa15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 DCLK2Q8N568 766 aa15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 ELSPBP1Q96BH3 223 aa15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 PAAF1Q9BRP4 392 aa15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 POLIQ9UNA4 740 aa15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 SMG5Q9UPR3 1016 aaKnown RBP15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 MRPS23Q9Y3D9 190 aaKnown RBP15.78■□□□□ 0.12
LYSMD3-202ENST00000453259 MAN2B1O00754 1011 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 NEMFO60524 1076 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 RECQL4O94761 1208 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 OR1D2P34982 312 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 NTHL1P78549 312 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 ADCY1Q08828 1119 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 SCRN1Q12765 414 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 STK3Q13188 491 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 PPP2R5AQ15172 486 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 TPRG1Q6ZUI0 275 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 ITFG1Q8TB96 612 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 OXER1Q8TDS5 423 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 RTKNQ9BST9 563 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 PDZD7Q9H5P4 517 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 TUFT1Q9NNX1 390 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 TRPV5Q9NQA5 729 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 PDRG1Q9NUG6 133 aa15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 CDV3Q9UKY7 258 aaKnown RBP15.77■□□□□ 0.12
LYSMD3-202ENST00000453259 GPR179Q6PRD1 2367 aa15.77■□□□□ 0.11
LYSMD3-202ENST00000453259 ARHGEF37A1IGU5 675 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 ACKR2O00590 384 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 USO1O60763 962 aaKnown RBP15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 PFKFB2O60825 505 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 LRP3O75074 770 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 LRRN2O75325 713 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 NAMPTP43490 491 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms