RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 RPUSD3Q6P087 351 aaKnown RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 OTUD6AQ7L8S5 288 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 GTF2IRD2Q86UP8 949 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 C2CD5Q86YS7 1000 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 SIAH1Q8IUQ4 282 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 CCDC170Q8IYT3 715 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 OR8H3Q8N146 312 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 DNAJB8Q8NHS0 232 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 ADAMTS15Q8TE58 950 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 CYB5D2Q8WUJ1 264 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 STON2Q8WXE9 905 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 ASB11Q8WXH4 323 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZNF566Q969W8 418 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZUFSPQ96AP4 578 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 COA7Q96BR5 231 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 COX4I2Q96KJ9 171 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 MOGAT1Q96PD6 335 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 TSGA13Q96PP4 275 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 SLC2A13Q96QE2 648 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 SENP6Q9GZR1 1112 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 C2orf40Q9H1Z8 148 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 VPS33BQ9H267 617 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 KCTD10Q9H3F6 313 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 EPB41L4AQ9HCS5 686 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 CCDC177Q9NQR7 707 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 WHRNQ9P202 907 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 CPSF2Q9P2I0 782 aaKnown RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 ATP6V0A2Q9Y487 856 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 CAPN6Q9Y6Q1 641 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 SYNJ2BP-COX16A0A087WUM0 186 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 H0Y626 953 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 PLOD2O00469 737 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 ELL2O00472 640 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 AP3D1O14617 1153 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CLEC3AO75596 197 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 EEF2P13639 858 aaKnown RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 HNRNPLP14866 589 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CYP7A1P22680 504 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CHMP24386 653 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 HOXC12P31275 282 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 HOXD13P35453 343 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 HADHAP40939 763 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 KIR3DL1P43629 444 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CEBPAP49715 358 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 MCM2P49736 904 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 DNM2P50570 870 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 MECP2P51608 486 aaKnown RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CLCN2P51788 898 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CREMQ03060 361 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 SEMA3AQ14563 771 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 WTAPQ15007 396 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 TAF7Q15545 349 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 SLC35G1Q2M3R5 365 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZNF792Q3KQV3 632 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 C5orf22Q49AR2 442 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CCDC157Q569K6 752 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 TOR2AQ5JU69 321 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 KLHDC7AQ5VTJ3 777 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 KAZNQ674X7 775 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 ALKBH5Q6P6C2 394 aaKnown RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CRTC1Q6UUV9 634 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 LBX2Q6XYB7 198 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 GALNT7Q86SF2 657 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 SLC9B2Q86UD5 537 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CDH24Q86UP0 819 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 MOGAT3Q86VF5 341 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 COL23A1Q86Y22 540 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CPOQ8IVL8 374 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 UNC45BQ8IWX7 931 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 TRMT2AQ8IZ69 625 aaKnown RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 TXLNBQ8N3L3 684 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 PRR18Q8N4B5 295 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 PPM1NQ8N819 430 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 C2orf69Q8N8R5 385 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 MIGA1Q8NAN2 632 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 UTP15Q8TED0 518 aaKnown RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 FNIP1Q8TF40 1166 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 KIF1BPQ96EK5 621 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 RCC1LQ96I51 464 aaKnown RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZNF845Q96IR2 970 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZC3H10Q96K80 434 aaKnown RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 PIGSQ96S52 555 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CELF4Q9BZC1 486 aaKnown RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 MS4A5Q9H3V2 200 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 TRMT1Q9NXH9 659 aaKnown RBP4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 KCTD5Q9NXV2 234 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 SH3BGRL2Q9UJC5 107 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZNF451Q9Y4E5 1061 aa4.91□□□□□ -1.62
HMGB3P21-201ENST00000452483 CCDC196A0A1B0GTZ2 297 aa4.9□□□□□ -1.63
HMGB3P21-201ENST00000452483 hCG_1807616A0A1W2PRN6 198 aa4.9□□□□□ -1.63
HMGB3P21-201ENST00000452483 F8W031 263 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P21-201ENST00000452483 H7C1D1 291 aa4.9□□□□□ -1.63
HMGB3P21-201ENST00000452483 ARVCFO00192 962 aa4.9□□□□□ -1.63
HMGB3P21-201ENST00000452483 SYT5O00445 386 aa4.9□□□□□ -1.63
HMGB3P21-201ENST00000452483 NDC80O14777 642 aa4.9□□□□□ -1.63
HMGB3P21-201ENST00000452483 NPC1O15118 1278 aa4.9□□□□□ -1.63
HMGB3P21-201ENST00000452483 IPO8O15397 1037 aaKnown RBP4.9□□□□□ -1.63
HMGB3P21-201ENST00000452483 KDM1AO60341 852 aa4.9□□□□□ -1.63
HMGB3P21-201ENST00000452483 PLA2G6O60733 806 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms