RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ZDHHC14Q8IZN3 488 aa13.7□□□□□ -0.22
CPSF4-208ENST00000452047 TMEM161BQ8NDZ6 487 aa13.7□□□□□ -0.22
CPSF4-208ENST00000452047 SPIRE2Q8WWL2 714 aa13.7□□□□□ -0.22
CPSF4-208ENST00000452047 RIN2Q8WYP3 895 aaPredicted RBP13.7□□□□□ -0.22
CPSF4-208ENST00000452047 ASIC4Q96FT7 647 aa13.7□□□□□ -0.22
CPSF4-208ENST00000452047 TARS2Q9BW92 718 aaKnown RBP13.7□□□□□ -0.22
CPSF4-208ENST00000452047 BACH2Q9BYV9 841 aa13.7□□□□□ -0.22
CPSF4-208ENST00000452047 RHOBTB2Q9BYZ6 727 aa13.7□□□□□ -0.22
CPSF4-208ENST00000452047 TMEM189-UBE2V1I3L0A0 370 aa13.69□□□□□ -0.22
CPSF4-208ENST00000452047 TGM5O43548 720 aa13.69□□□□□ -0.22
CPSF4-208ENST00000452047 BMP15O95972 392 aa13.69□□□□□ -0.22
CPSF4-208ENST00000452047 PLS3P13797 630 aa13.69□□□□□ -0.22
CPSF4-208ENST00000452047 RPL17P18621 184 aaKnown RBP13.69□□□□□ -0.22
CPSF4-208ENST00000452047 XKR4Q5GH76 650 aa13.69□□□□□ -0.22
CPSF4-208ENST00000452047 LILRA6Q6PI73 481 aa13.69□□□□□ -0.22
CPSF4-208ENST00000452047 PRSS55Q6UWB4 352 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-208ENST00000452047 ALKAL1Q6UXT8 129 aa13.69□□□□□ -0.22
CPSF4-208ENST00000452047 TDRD5Q8NAT2 981 aaKnown RBP13.69□□□□□ -0.22
CPSF4-208ENST00000452047 HDAC7Q8WUI4 952 aa13.69□□□□□ -0.22
CPSF4-208ENST00000452047 PIK3R5Q8WYR1 880 aa13.69□□□□□ -0.22
CPSF4-208ENST00000452047 CDK5RAP3Q96JB5 506 aa13.69□□□□□ -0.22
CPSF4-208ENST00000452047 DOCK8Q8NF50 2099 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 NPHP3-ACAD11A0A0J9YXS1 232 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 SMIM28A0A1B0GU29 152 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 VPS37CA5D8V6 355 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-208ENST00000452047 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 MEFVO15553 781 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-208ENST00000452047 RFPL2O75678 378 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 MAPTP10636 758 aaKnown RBP13.68□□□□□ -0.22
CPSF4-208ENST00000452047 MCF2P10911 925 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 IGFBP6P24592 240 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-208ENST00000452047 CLCNKBP51801 687 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 CACNB1Q02641 598 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-208ENST00000452047 CREMQ03060 361 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 SOX4Q06945 474 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-208ENST00000452047 SF3A1Q15459 793 aaKnown RBP13.68□□□□□ -0.22
CPSF4-208ENST00000452047 UPP1Q16831 310 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 FAM171A1Q5VUB5 890 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 MPZL3Q6UWV2 235 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 CD300LGQ6UXG3 332 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 CCDC149Q6ZUS6 474 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 PALB2Q86YC2 1186 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 GLYCTKQ8IVS8 523 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 KREMEN2Q8NCW0 462 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 C3orf58Q8NDZ4 430 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 LNX1Q8TBB1 728 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-208ENST00000452047 KCNN1Q92952 543 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 ZNF707Q96C28 371 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-208ENST00000452047 FAM122AQ96E09 287 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 SNX27Q96L92 541 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 MFSD14AQ96MC6 490 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 TTPALQ9BTX7 342 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 CCDC94Q9BW85 323 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-208ENST00000452047 PLEKHA4Q9H4M7 779 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 GOLGA2P5Q9HBQ8 144 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 TOPORSQ9NS56 1045 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-208ENST00000452047 BLOC1S4Q9NUP1 217 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 DPP7Q9UHL4 492 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 SORCS3Q9UPU3 1222 aa13.68□□□□□ -0.22
CPSF4-208ENST00000452047 CCDC195A0A1B0GUA6 201 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 TOM1L1O75674 476 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 ASGR2P07307 311 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 SPATA31D3P0C874 917 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 MYBP10242 640 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 PLCG1P19174 1290 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 PDCP20941 246 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 LONP1P36776 959 aaKnown RBP13.67□□□□□ -0.22
CPSF4-208ENST00000452047 UBA7P41226 1012 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 NCKAP1LP55160 1127 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 OSTNP61366 133 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 ELAVL2Q12926 359 aaKnown RBP13.67□□□□□ -0.22
CPSF4-208ENST00000452047 STRN3Q13033 797 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 MTMR3Q13615 1198 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 PTPAQ15257 358 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 PSMD5Q16401 504 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 ELMSAN1Q6PJG2 1045 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 CYP26C1Q6V0L0 522 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 SPATA31D4Q6ZUB0 917 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 ZBTB33Q86T24 672 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 PLCD3Q8N3E9 789 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 PBXIP1Q96AQ6 731 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 CALML4Q96GE6 196 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 ZBTB45Q96K62 511 aaPredicted RBP13.67□□□□□ -0.22
CPSF4-208ENST00000452047 UROC1Q96N76 676 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 ZMAT2Q96NC0 199 aaKnown RBP13.67□□□□□ -0.22
CPSF4-208ENST00000452047 CLSTN3Q9BQT9 956 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 REEP2Q9BRK0 252 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 CNTN3Q9P232 1028 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 ODF2LQ9ULJ1 636 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 MYO15AQ9UKN7 3530 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 USP34Q70CQ2 3546 aa13.67□□□□□ -0.22
CPSF4-208ENST00000452047 MYH15Q9Y2K3 1946 aa13.66□□□□□ -0.22
CPSF4-208ENST00000452047 N4BP1O75113 896 aaKnown RBP13.66□□□□□ -0.22
CPSF4-208ENST00000452047 B3GAT3O94766 335 aa13.66□□□□□ -0.22
CPSF4-208ENST00000452047 KCNE1P15382 129 aa13.66□□□□□ -0.22
CPSF4-208ENST00000452047 SYT1P21579 422 aa13.66□□□□□ -0.22
CPSF4-208ENST00000452047 FGFR3P22607 806 aa13.66□□□□□ -0.22
CPSF4-208ENST00000452047 ZNF131P52739 623 aa13.66□□□□□ -0.22
CPSF4-208ENST00000452047 SMTNP53814 917 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms