RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 ZPBP2Q6X784 338 aa13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 KRI1Q8N9T8 703 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 LINC00301Q8NCQ3 95 aa13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 HASPINQ8TF76 798 aa13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 CCDC94Q9BW85 323 aaPredicted RBP13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 PHF7Q9BWX1 381 aaPredicted RBP13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 EMILIN2Q9BXX0 1053 aa13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 PANK2Q9BZ23 570 aa13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 ADAM7Q9H2U9 754 aa13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 PARVGQ9HBI0 331 aa13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 DAXXQ9UER7 740 aaPredicted RBP13.53□□□□□ -0.24
CSNK1E-211ENST00000451964 TRAK2O60296 914 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 FAM13AO94988 1023 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 KRT18P05783 430 aaKnown RBP13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 HARSP12081 509 aaKnown RBP13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 SOX4Q06945 474 aaPredicted RBP13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 MCL1Q07820 350 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 SLC10A6Q3KNW5 377 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 USP41Q3LFD5 358 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 RTP2Q5QGT7 225 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 RARS2Q5T160 578 aaKnown RBP13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 RRAGBQ5VZM2 374 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 KIAA1841Q6NSI8 718 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 APBB1IPQ7Z5R6 666 aaPredicted RBP13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 PPFIBP1Q86W92 1011 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 RNF135Q8IUD6 432 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 RPGRIP1Q96KN7 1286 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 SNX27Q96L92 541 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 FBXL18Q96ME1 805 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 ACAP3Q96P50 834 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 POP1Q99575 1024 aaKnown RBP13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 ZHX3Q9H4I2 956 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 GOLGA2P5Q9HBQ8 144 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 TBX20Q9UMR3 447 aa13.52□□□□□ -0.25
CSNK1E-211ENST00000451964 MYMKA6NI61 221 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 CLDN3O15551 220 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 ZSCAN22P10073 491 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 MYBP10242 640 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 KCNE1P15382 129 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 RPL17P18621 184 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 NMT1P30419 496 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 CLCNKBP51801 687 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 YARSP54577 528 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 ITIH3Q06033 890 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 STK38Q15208 465 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 UPP1Q16831 310 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 FOXD4L6Q3SYB3 417 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 ZC2HC1CQ53FD0 456 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 FAM171A1Q5VUB5 890 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 PRSS55Q6UWB4 352 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 TMC5Q6UXY8 1006 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 FOXD4L3Q6VB84 417 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 DYMQ7RTS9 669 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 C3orf58Q8NDZ4 430 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 RIN2Q8WYP3 895 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 C1QTNF1Q9BXJ1 281 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 POMKQ9H5K3 350 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 DZANK1Q9NVP4 752 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 STK17AQ9UEE5 414 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 CCDC39Q9UFE4 941 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 SSX2IPQ9Y2D8 614 aa13.51□□□□□ -0.25
CSNK1E-211ENST00000451964 SF3B1O75533 1304 aaKnown RBP eCLIP13.5□□□□□ -0.252e-6■■■■■ 43.1
CSNK1E-211ENST00000451964 FAM86C2PA6NEL3 165 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 H0YCG3 227 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 K7ENM7 598 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 SPTLC2O15270 562 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 DCXO43602 365 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 TBCAO75347 108 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 B3GAT3O94766 335 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 PIGRP01833 764 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 HSP90AA1P07900 732 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 SPATA31D3P0C874 917 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 GTF2BQ00403 316 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 NOLC1Q14978 699 aaKnown RBP eCLIP13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 ZBTB41Q5SVQ8 909 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 CES5AQ6NT32 575 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 SLC39A4Q6P5W5 647 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 LILRA6Q6PI73 481 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 DCLRE1AQ6PJP8 1040 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 SPATA31D4Q6ZUB0 917 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 PALB2Q86YC2 1186 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 GPR65Q8IYL9 337 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 TMEM130Q8N3G9 435 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 LNX1Q8TBB1 728 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 DDX12PQ92771 950 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 C18orf25Q96B23 403 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 DNAJC19Q96DA6 116 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 ZNF396Q96N95 335 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 LRFN3Q9BTN0 628 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 TTPALQ9BTX7 342 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 IKZF4Q9H2S9 585 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 TOPORSQ9NS56 1045 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 CNTN3Q9P232 1028 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 FNIP2Q9P278 1114 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 MUTYHQ9UIF7 546 aa13.5□□□□□ -0.25
CSNK1E-211ENST00000451964 TISP43B9A030 160 aa13.49□□□□□ -0.25
CSNK1E-211ENST00000451964 ANKRD63C9JTQ0 380 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms