RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 ADPGKQ9BRR6 497 aa9.56□□□□□ -0.88
RFX3-209ENST00000451859 HERC2P3Q9BVR0 1158 aa9.56□□□□□ -0.88
RFX3-209ENST00000451859 PHF7Q9BWX1 381 aaPredicted RBP9.56□□□□□ -0.88
RFX3-209ENST00000451859 CCDC113Q9H0I3 377 aa9.56□□□□□ -0.88
RFX3-209ENST00000451859 S1PR5Q9H228 398 aa9.56□□□□□ -0.88
RFX3-209ENST00000451859 CXCL16Q9H2A7 254 aa9.56□□□□□ -0.88
RFX3-209ENST00000451859 FZD8Q9H461 694 aa9.56□□□□□ -0.88
RFX3-209ENST00000451859 POMKQ9H5K3 350 aa9.56□□□□□ -0.88
RFX3-209ENST00000451859 MRPL17Q9NRX2 175 aaKnown RBP9.56□□□□□ -0.88
RFX3-209ENST00000451859 GIT1Q9Y2X7 761 aa9.56□□□□□ -0.88
RFX3-209ENST00000451859 HCN4Q9Y3Q4 1203 aa9.56□□□□□ -0.88
RFX3-209ENST00000451859 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.56□□□□□ -0.88
RFX3-209ENST00000451859 SFI1A8K8P3 1242 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 LOC730098B7Z3J9 87 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 GPR37L1O60883 481 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 SOD2P04179 222 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 HARSP12081 509 aaKnown RBP9.55□□□□□ -0.88
RFX3-209ENST00000451859 HOXB8P17481 243 aaPredicted RBP9.55□□□□□ -0.88
RFX3-209ENST00000451859 MUTP22033 750 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 PRPHP41219 470 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 ATP2C1P98194 919 aaPredicted RBP9.55□□□□□ -0.88
RFX3-209ENST00000451859 DSC1Q08554 894 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 GRIK3Q13003 919 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 GIT2Q14161 759 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 FAM187BQ17R55 369 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 GLRA4Q5JXX5 417 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 ATF7IP2Q5U623 682 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 GSTCDQ8NEC7 633 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 KLHL5Q96PQ7 755 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 PAAF1Q9BRP4 392 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 MMTAG2Q9BU76 263 aaKnown RBP9.55□□□□□ -0.88
RFX3-209ENST00000451859 COLEC11Q9BWP8 271 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 EMILIN2Q9BXX0 1053 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 KMT5AQ9NQR1 393 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 DZANK1Q9NVP4 752 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 MUC6Q6W4X9 2439 aa9.55□□□□□ -0.88
RFX3-209ENST00000451859 K7ERI5 159 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 ACKR2O00590 384 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 PTGESO14684 152 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 INPPL1O15357 1258 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 SLC16A4O15374 487 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 TEX28O15482 410 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 SPATA31D3P0C874 917 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 MTHFRP42898 656 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 NPTX2P47972 431 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 EFNA5P52803 228 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 OSTNP61366 133 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 DMP1Q13316 513 aaPredicted RBP9.54□□□□□ -0.88
RFX3-209ENST00000451859 DHX8Q14562 1220 aaKnown RBP9.54□□□□□ -0.88
RFX3-209ENST00000451859 DCAF4L1Q3SXM0 396 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 ZNF568Q3ZCX4 644 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 HERC4Q5GLZ8 1057 aaPredicted RBP9.54□□□□□ -0.88
RFX3-209ENST00000451859 NT5DC1Q5TFE4 455 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 RINT1Q6NUQ1 792 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 FUT10Q6P4F1 479 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 SPATA31D4Q6ZUB0 917 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 PPFIBP1Q86W92 1011 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 DAW1Q8N136 415 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 CEP120Q8N960 986 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 RASSF8Q8NHQ8 419 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 SLC22A17Q8WUG5 538 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 DRC1Q96MC2 740 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 FBXL18Q96ME1 805 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 PNMA5Q96PV4 448 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 TMUB1Q9BVT8 246 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 GPR62Q9BZJ7 368 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 ADAM7Q9H2U9 754 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 MAN1C1Q9NR34 630 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 IRAK3Q9Y616 596 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 PHLPP2Q6ZVD8 1323 aa9.54□□□□□ -0.88
RFX3-209ENST00000451859 ZDBF2Q9HCK1 2354 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 NPHP3-ACAD11A0A0J9YXS1 232 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 PRR33A8MZF0 331 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 C2CD4DB7Z1M9 353 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 TADA2AO75478 443 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 KIF4AO95239 1232 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 THP07101 528 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 ADH1AP07327 375 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 RPL17P18621 184 aaKnown RBP9.53□□□□□ -0.88
RFX3-209ENST00000451859 CLCN4P51793 760 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 ITIH3Q06033 890 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 MAPK7Q13164 816 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 TUSC3Q13454 348 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 HSP90AA2PQ14568 343 aaPredicted RBP9.53□□□□□ -0.88
RFX3-209ENST00000451859 ATAT1Q5SQI0 421 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 PRSS55Q6UWB4 352 aaPredicted RBP9.53□□□□□ -0.88
RFX3-209ENST00000451859 HFE2Q6ZVN8 426 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 CEP57Q86XR8 500 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 PALB2Q86YC2 1186 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 RIN2Q8WYP3 895 aaPredicted RBP9.53□□□□□ -0.88
RFX3-209ENST00000451859 RIPOR3Q96MK2 946 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 TCHPQ9BT92 498 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 TARS2Q9BW92 718 aaKnown RBP9.53□□□□□ -0.88
RFX3-209ENST00000451859 SFXN1Q9H9B4 322 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 ANKFY1Q9P2R3 1169 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 ADAM28Q9UKQ2 775 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 NR2E1Q9Y466 385 aa9.53□□□□□ -0.88
RFX3-209ENST00000451859 ZMYM2Q9UBW7 1377 aa9.52□□□□□ -0.88
RFX3-209ENST00000451859 LILRB3O75022 631 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms