RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 IRAK3Q9Y616 596 aa10.62□□□□□ -0.71
USP54-207ENST00000451492 ZMYM2Q9UBW7 1377 aa10.62□□□□□ -0.71
USP54-207ENST00000451492 NCOR1O75376 2440 aa10.62□□□□□ -0.71
USP54-207ENST00000451492 SF3B1O75533 1304 aaKnown RBP eCLIP10.61□□□□□ -0.719e-6■■■■■ 68.9
USP54-207ENST00000451492 LOC730098B7Z3J9 87 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
USP54-207ENST00000451492 TEX28O15482 410 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 TBCAO75347 108 aaKnown RBP10.61□□□□□ -0.71
USP54-207ENST00000451492 ADH1AP07327 375 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 ALADP13716 330 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 HOXB8P17481 243 aaPredicted RBP10.61□□□□□ -0.71
USP54-207ENST00000451492 GRM5P41594 1212 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 CLCNKBP51801 687 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 NOLC1Q14978 699 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP54-207ENST00000451492 PTPAQ15257 358 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 USP41Q3LFD5 358 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 MPZL3Q6UWV2 235 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 DYMQ7RTS9 669 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 PPFIBP1Q86W92 1011 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 TMEM130Q8N3G9 435 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 MYCT1Q8N699 235 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 TMEM161BQ8NDZ6 487 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 SLC22A17Q8WUG5 538 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 INTS4Q96HW7 963 aaKnown RBP10.61□□□□□ -0.71
USP54-207ENST00000451492 SFXN1Q9H9B4 322 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 LARSQ9P2J5 1176 aaKnown RBP10.61□□□□□ -0.71
USP54-207ENST00000451492 STK39Q9UEW8 545 aa10.61□□□□□ -0.71
USP54-207ENST00000451492 FBXO2Q9UK22 296 aaPredicted RBP10.61□□□□□ -0.71
USP54-207ENST00000451492 RBM19Q9Y4C8 960 aaKnown RBP10.61□□□□□ -0.71
USP54-207ENST00000451492 C2CD4DB7Z1M9 353 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 I3L4J1 428 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 GLUD1P00367 558 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 MAPTP10636 758 aaKnown RBP10.6□□□□□ -0.71
USP54-207ENST00000451492 IGFBP6P24592 240 aaPredicted RBP10.6□□□□□ -0.71
USP54-207ENST00000451492 NMT1P30419 496 aaKnown RBP10.6□□□□□ -0.71
USP54-207ENST00000451492 TXLNAP40222 546 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 NCKAP1LP55160 1127 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 DSG1Q02413 1049 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 ITIH3Q06033 890 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 SOX4Q06945 474 aaPredicted RBP10.6□□□□□ -0.71
USP54-207ENST00000451492 SPAG1Q07617 926 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 STK38Q15208 465 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 NAB2Q15742 525 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 RTP2Q5QGT7 225 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 FAM171A1Q5VUB5 890 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 RNF168Q8IYW5 571 aaPredicted RBP10.6□□□□□ -0.71
USP54-207ENST00000451492 SNX27Q96L92 541 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 RIPOR3Q96MK2 946 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 PPP1R10Q96QC0 940 aaKnown RBP10.6□□□□□ -0.71
USP54-207ENST00000451492 PANK2Q9BZ23 570 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 ADAM7Q9H2U9 754 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 C17orf75Q9HAS0 396 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 TOPORSQ9NS56 1045 aaPredicted RBP10.6□□□□□ -0.71
USP54-207ENST00000451492 KCND2Q9NZV8 630 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 CCDC39Q9UFE4 941 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 ODF2LQ9ULJ1 636 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 SSX2IPQ9Y2D8 614 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 TSC2P49815 1807 aa10.6□□□□□ -0.71
USP54-207ENST00000451492 KMT2EQ8IZD2 1858 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 SMIM28A0A1B0GU29 152 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 ABLIM1O14639 778 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 HNRNPDLO14979 420 aaKnown RBP10.59□□□□□ -0.71
USP54-207ENST00000451492 LILRB3O75022 631 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 RFPL2O75678 378 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 B3GAT3O94766 335 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 CXCL8P10145 99 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 MCF2P10911 925 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 PROZP22891 400 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 TNFSF9P41273 254 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 MTHFRP42898 656 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 BRCC3P46736 316 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 LIG4P49917 911 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 PSMD5Q16401 504 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 KIAA0319Q5VV43 1072 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 HAUS6Q7Z4H7 955 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 PDILTQ8N807 584 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 TDRD5Q8NAT2 981 aaKnown RBP10.59□□□□□ -0.71
USP54-207ENST00000451492 C3orf58Q8NDZ4 430 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 SPIRE2Q8WWL2 714 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 C18orf25Q96B23 403 aaPredicted RBP10.59□□□□□ -0.71
USP54-207ENST00000451492 FAM212AQ96EL1 285 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 ZMAT2Q96NC0 199 aaKnown RBP10.59□□□□□ -0.71
USP54-207ENST00000451492 ACAP3Q96P50 834 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 TTPALQ9BTX7 342 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 HAPLN2Q9GZV7 340 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 ZSCAN16Q9H4T2 348 aaPredicted RBP10.59□□□□□ -0.71
USP54-207ENST00000451492 PARVGQ9HBI0 331 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 PTPRHQ9HD43 1115 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 TFIP11Q9UBB9 837 aaKnown RBP10.59□□□□□ -0.71
USP54-207ENST00000451492 NR2E1Q9Y466 385 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 SRPRBQ9Y5M8 271 aaKnown RBP10.59□□□□□ -0.71
USP54-207ENST00000451492 MYO10Q9HD67 2058 aa10.59□□□□□ -0.71
USP54-207ENST00000451492 DOCK6Q96HP0 2047 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 CCDC195A0A1B0GUA6 201 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 H0YCG3 227 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 PODXLO00592 558 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 CLDN3O15551 220 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 SLC26A4O43511 780 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 TGM5O43548 720 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 TRAK2O60296 914 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms