RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 HARSP12081 509 aaKnown RBP9.17□□□□□ -0.94
LSM5-208ENST00000450169 PORP16435 677 aaPredicted RBP9.17□□□□□ -0.94
LSM5-208ENST00000450169 CRABP2P29373 138 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 CHRNA3P32297 505 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 GJA5P36382 358 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 CDC16Q13042 620 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 TNIP1Q15025 636 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 ZNF568Q3ZCX4 644 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 GRAMD4Q6IC98 578 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 TMEM53Q6P2H8 277 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 H2AFVQ71UI9 128 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 IRF2BP2Q7Z5L9 587 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 CATIPQ7Z7H3 387 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 MTDHQ86UE4 582 aaKnown RBP9.17□□□□□ -0.94
LSM5-208ENST00000450169 C7orf43Q8WVR3 580 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 GAB3Q8WWW8 586 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 ART4Q93070 314 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 SETDB2Q96T68 719 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 TSG101Q99816 390 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 POLR3CQ9BUI4 534 aaPredicted RBP9.17□□□□□ -0.94
LSM5-208ENST00000450169 RNF41Q9H4P4 317 aaPredicted RBP9.17□□□□□ -0.94
LSM5-208ENST00000450169 ZNF180Q9UJW8 692 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 ZNF148Q9UQR1 794 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 PCDHA3Q9Y5H8 950 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 ATP8B3O60423 1300 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 CAMTA1Q9Y6Y1 1673 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 FAM47DPA6NHR8 397 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 GSG1L2A8MUP6 293 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 EDF1O60869 148 aaKnown RBP9.17□□□□□ -0.94
LSM5-208ENST00000450169 TROVE2P10155 538 aaKnown RBP eCLIP9.17□□□□□ -0.94
LSM5-208ENST00000450169 SCG2P13521 617 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 ATF3P18847 181 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 DNAJB2P25686 324 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 EMP3P54852 163 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 WDR4P57081 412 aaKnown RBP9.17□□□□□ -0.94
LSM5-208ENST00000450169 ZNF211Q13398 564 aaPredicted RBP9.17□□□□□ -0.94
LSM5-208ENST00000450169 TXNRD1Q16881 649 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 INF2Q27J81 1249 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 TRIM67Q6ZTA4 783 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 TMTC3Q6ZXV5 915 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 EPM2AIP1Q7L775 607 aaPredicted RBP9.17□□□□□ -0.94
LSM5-208ENST00000450169 NLRP9Q7RTR0 991 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 TMEM110Q86TL2 294 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 SRBD1Q8N5C6 995 aaKnown RBP9.17□□□□□ -0.94
LSM5-208ENST00000450169 SPZ1Q9BXG8 430 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 NACAP1Q9BZK3 213 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 GANQ9H2C0 597 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 ARMT1Q9H993 441 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 DDX18Q9NVP1 670 aaKnown RBP9.17□□□□□ -0.94
LSM5-208ENST00000450169 NDE1Q9NXR1 346 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 TBK1Q9UHD2 729 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 PCYOX1Q9UHG3 505 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 ZMIZ1Q9ULJ6 1067 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 EFR3BQ9Y2G0 817 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 CNTNAP5Q8WYK1 1306 aa9.17□□□□□ -0.94
LSM5-208ENST00000450169 HTR3EA5X5Y0 456 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 C2CD2LO14523 706 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 ANPEPP15144 967 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 GNAT2P19087 354 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 VCAM1P19320 739 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 GRM2Q14416 872 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 NR6A1Q15406 480 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 RGS9BPQ6ZS82 235 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 PHLDB2Q86SQ0 1253 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 ENAHQ8N8S7 591 aaPredicted RBP9.16□□□□□ -0.94
LSM5-208ENST00000450169 CEP70Q8NHQ1 597 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 GFM2Q969S9 779 aaKnown RBP9.16□□□□□ -0.94
LSM5-208ENST00000450169 EBF3Q9H4W6 596 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 PPP1R9AQ9ULJ8 1098 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 TDRKHQ9Y2W6 561 aaKnown RBP9.16□□□□□ -0.94
LSM5-208ENST00000450169 CCDC88AQ3V6T2 1871 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 AKAP11Q9UKA4 1901 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 PIK3CDO00329 1044 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 VILLO15195 856 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 ZNF862O60290 1169 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 PIM1P11309 404 aaPredicted RBP9.16□□□□□ -0.94
LSM5-208ENST00000450169 MUTP22033 750 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 AMPD1P23109 780 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 GTF2H1P32780 548 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 VPS41P49754 854 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 SERPINB8P50452 374 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 CALCOCO2Q13137 446 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 TMEM266Q2M3C6 531 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 MAP7D1Q3KQU3 841 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 TMEM164Q5U3C3 297 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 LRRC8BQ6P9F7 803 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 CYFIP1Q7L576 1253 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 VPS36Q86VN1 386 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 CCDC65Q8IXS2 484 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 BLIDQ8IZY5 108 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 ANKRD35Q8N283 1001 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 FNDC8Q8TC99 324 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 PTCD3Q96EY7 689 aaKnown RBP9.16□□□□□ -0.94
LSM5-208ENST00000450169 CDK5RAP3Q96JB5 506 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 AK8Q96MA6 479 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 TUBB6Q9BUF5 446 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 USP29Q9HBJ7 922 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 UBN1Q9NPG3 1134 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 RIC8AQ9NPQ8 531 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 FAIMQ9NVQ4 179 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms