RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 CEP57Q86XR8 500 aa19.04■□□□□ 0.64
CLTCL1-203ENST00000449918 PALB2Q86YC2 1186 aa19.04■□□□□ 0.64
CLTCL1-203ENST00000449918 PBXIP1Q96AQ6 731 aa19.04■□□□□ 0.64
CLTCL1-203ENST00000449918 ACSF2Q96CM8 615 aaPredicted RBP19.04■□□□□ 0.64
CLTCL1-203ENST00000449918 UROC1Q96N76 676 aa19.04■□□□□ 0.64
CLTCL1-203ENST00000449918 TTPALQ9BTX7 342 aa19.04■□□□□ 0.64
CLTCL1-203ENST00000449918 TARS2Q9BW92 718 aaKnown RBP19.04■□□□□ 0.64
CLTCL1-203ENST00000449918 CDT1Q9H211 546 aa19.04■□□□□ 0.64
CLTCL1-203ENST00000449918 TDRD15B5MCY1 1934 aaKnown RBP19.04■□□□□ 0.64
CLTCL1-203ENST00000449918 CCDC195A0A1B0GUA6 201 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 H0YCG3 227 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 SF3A1Q15459 793 aaKnown RBP19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 PDXDC1Q6P996 788 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 DCLRE1AQ6PJP8 1040 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 MPZL3Q6UWV2 235 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 OTOP3Q7RTS5 596 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 TAS1R3Q7RTX0 852 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 RASSF8Q8NHQ8 419 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 HASPINQ8TF76 798 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 ACAP3Q96P50 834 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 PPP1R10Q96QC0 940 aaKnown RBP19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 BACH2Q9BYV9 841 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 RHOBTB2Q9BYZ6 727 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 CXCL16Q9H2A7 254 aa19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 LARSQ9P2J5 1176 aaKnown RBP19.03■□□□□ 0.64
CLTCL1-203ENST00000449918 SMIM28A0A1B0GU29 152 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 TGM5O43548 720 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 B3GAT3O94766 335 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 BRD1O95696 1058 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 PROZP22891 400 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 OSTNP61366 133 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 MTMR3Q13615 1198 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 GLRA4Q5JXX5 417 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 RTP2Q5QGT7 225 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 UBALD2Q8IYN6 164 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 KREMEN2Q8NCW0 462 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 TMEM161BQ8NDZ6 487 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 KCNH6Q9H252 994 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 SLC38A7Q9NVC3 462 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 LIMD1Q9UGP4 676 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 SORCS3Q9UPU3 1222 aa19.02■□□□□ 0.64
CLTCL1-203ENST00000449918 TMEM189-UBE2V1I3L0A0 370 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 TRAPPC3O43617 180 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 TOM1L1O75674 476 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 SPATA31D3P0C874 917 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 MAPTP10636 758 aaKnown RBP19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 SCP2P22307 547 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 XKR4Q5GH76 650 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 LILRA6Q6PI73 481 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 PRSS55Q6UWB4 352 aaPredicted RBP19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 ALKAL1Q6UXT8 129 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 ZPBP2Q6X784 338 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 SPATA31D4Q6ZUB0 917 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 GLYCTKQ8IVS8 523 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 PIK3R5Q8WYR1 880 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 STAMQ92783 540 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 DDX27Q96GQ7 796 aaKnown RBP19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 INTS4Q96HW7 963 aaKnown RBP19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 ZDHHC7Q9NXF8 308 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 ODF2LQ9ULJ1 636 aa19.01■□□□□ 0.63
CLTCL1-203ENST00000449918 NPHP3-ACAD11A0A0J9YXS1 232 aa19■□□□□ 0.63
CLTCL1-203ENST00000449918 RPL17P18621 184 aaKnown RBP19■□□□□ 0.63
CLTCL1-203ENST00000449918 CLCNKBP51801 687 aa19■□□□□ 0.63
CLTCL1-203ENST00000449918 UPP1Q16831 310 aa19■□□□□ 0.63
CLTCL1-203ENST00000449918 ARSHQ5FYA8 562 aa19■□□□□ 0.63
CLTCL1-203ENST00000449918 PDZRN4Q6ZMN7 1036 aaPredicted RBP19■□□□□ 0.63
CLTCL1-203ENST00000449918 GPBP1Q86WP2 473 aa19■□□□□ 0.63
CLTCL1-203ENST00000449918 SUGP1Q8IWZ8 645 aaKnown RBP19■□□□□ 0.63
CLTCL1-203ENST00000449918 CEP120Q8N960 986 aa19■□□□□ 0.63
CLTCL1-203ENST00000449918 LNX1Q8TBB1 728 aaPredicted RBP19■□□□□ 0.63
CLTCL1-203ENST00000449918 PIDD1Q9HB75 910 aa19■□□□□ 0.63
CLTCL1-203ENST00000449918 ABLIM1O14639 778 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 CLDN3O15551 220 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 RFPL2O75678 378 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 KRT18P05783 430 aaKnown RBP18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 MYBP10242 640 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 HARSP12081 509 aaKnown RBP18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 KCNE1P15382 129 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 SYT1P21579 422 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 DHX8Q14562 1220 aaKnown RBP18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 NOLC1Q14978 699 aaKnown RBP eCLIP18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 PSMD5Q16401 504 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 FEZF2Q8TBJ5 459 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 SMG7Q92540 1137 aaKnown RBP18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 ASIC4Q96FT7 647 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 SNX27Q96L92 541 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 CLSTN3Q9BQT9 956 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 WDR6Q9NNW5 1121 aaKnown RBP18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 ANKFY1Q9P2R3 1169 aa18.99■□□□□ 0.63
CLTCL1-203ENST00000449918 FAM13AO94988 1023 aa18.98■□□□□ 0.63
CLTCL1-203ENST00000449918 PAPLNO95428 1278 aa18.98■□□□□ 0.63
CLTCL1-203ENST00000449918 PLCG1P19174 1290 aa18.98■□□□□ 0.63
CLTCL1-203ENST00000449918 FGFR3P22607 806 aa18.98■□□□□ 0.63
CLTCL1-203ENST00000449918 MATR3P43243 847 aaKnown RBP eCLIP18.98■□□□□ 0.63
CLTCL1-203ENST00000449918 NCKAP1LP55160 1127 aa18.98■□□□□ 0.63
CLTCL1-203ENST00000449918 CACNB1Q02641 598 aaPredicted RBP18.98■□□□□ 0.63
CLTCL1-203ENST00000449918 GRIN1Q05586 938 aa18.98■□□□□ 0.63
CLTCL1-203ENST00000449918 KARSQ15046 597 aaKnown RBP18.98■□□□□ 0.63
CLTCL1-203ENST00000449918 HAUS6Q7Z4H7 955 aa18.98■□□□□ 0.63
CLTCL1-203ENST00000449918 FBXL6Q8N531 539 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms