RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	MICALCL	Q6ZW33	695 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	MCPH1	Q8NEM0	835 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	PSPC1	Q8WXF1	523 aa	Known RBP	18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	PPAN	Q9NQ55	473 aa	Known RBP	18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	XPNPEP1	Q9NQW7	623 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	DGAT1	O75907	488 aa		18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	RGS20	O76081	388 aa		18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	RARA	P10276	462 aa		18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	C15orf39	Q6ZRI6	1047 aa		18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	TAS1R3	Q7RTX0	852 aa		18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	PGM2	Q96G03	612 aa		18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	CAND2	O75155	1236 aa		18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	FNTA	P49354	379 aa		18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	LIG3	P49916	1009 aa		18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	DENND2C	Q68D51	928 aa		18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	ARHGAP28	Q9P2N2	729 aa		18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	CNOT7	Q9UIV1	285 aa	Known RBP	18.15	■□□□□ 0.5
TOM1-210	ENST00000449058	NFASC	O94856	1347 aa		18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	HNRNPDL	O14979	420 aa	Known RBP	18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	PSAP	P07602	524 aa		18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	DLAT	P10515	647 aa	Known RBP	18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	CLDN10	P78369	228 aa		18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	BYSL	Q13895	437 aa	Known RBP	18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	MICALL1	Q8N3F8	863 aa		18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	ART4	Q93070	314 aa		18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	ELMO3	Q96BJ8	720 aa		18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	CYFIP2	Q96F07	1278 aa		18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	LRRC19	Q9H756	370 aa		18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	CNOT10	Q9H9A5	744 aa	Known RBP	18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	MTRF1L	Q9UGC7	380 aa	Known RBP	18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	TELO2	Q9Y4R8	837 aa		18.14	■□□□□ 0.49
TOM1-210	ENST00000449058	FSCN2	O14926	492 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	UNG	P13051	313 aa	Predicted RBP	18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	OAZ1	P54368	228 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	BACE1	P56817	501 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	SWSAP1	Q6NVH7	229 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	CYFIP1	Q7L576	1253 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	NSUN6	Q8TEA1	469 aa	Known RBP	18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	RAPGEF5	Q92565	580 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	SLCO2A1	Q92959	643 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	FAM81B	Q96LP2	452 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	FAM213A	Q9BRX8	229 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	PI4K2A	Q9BTU6	479 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	FAM129A	Q9BZQ8	928 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	TULP1	O00294	542 aa	Predicted RBP	18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	KIAA0754	O94854	1291 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	SNRNP48	Q6IEG0	339 aa	Known RBP	18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	C6orf89	Q6UWU4	347 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	CCDC105	Q8IYK2	499 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	ZNF516	Q92618	1163 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	TMEM109	Q9BVC6	243 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	AVEN	Q9NQS1	362 aa	Predicted RBP	18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	CYP26B1	Q9NR63	512 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	ADAMTS5	Q9UNA0	930 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	SI	P14410	1827 aa		18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	MYH9	P35579	1960 aa	Known RBP	18.13	■□□□□ 0.49
TOM1-210	ENST00000449058	KRT5	P13647	590 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	SLC29A2	Q14542	456 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	CCDC60	Q8IWA6	550 aa	Predicted RBP	18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	JDP2	Q8WYK2	163 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	CENPT	Q96BT3	561 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	SEMA4A	Q9H3S1	761 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	ATP6V0A4	Q9HBG4	840 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	JPH1	Q9HDC5	661 aa	Predicted RBP	18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	ZNF214	Q9UL59	606 aa	Predicted RBP	18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	PASK	Q96RG2	1323 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	C5orf60	A6NFR6	353 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058		H0YCG3	227 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	RPS12	P25398	132 aa	Known RBP	18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	ABCD1	P33897	745 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	PRKCE	Q02156	737 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	ABHD15	Q6UXT9	468 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	MCOLN2	Q8IZK6	566 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	OTUD6B	Q8N6M0	293 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	IFT74	Q96LB3	600 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	KIAA1586	Q9HCI6	787 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	C1orf112	Q9NSG2	853 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	SLC9A2	Q9UBY0	812 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	SEPT9	Q9UHD8	586 aa	Predicted RBP	18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	MYPN	Q86TC9	1320 aa		18.12	■□□□□ 0.49
TOM1-210	ENST00000449058	EXTL3	O43909	919 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	CALCA	P01258	141 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	ACTR2	P61160	394 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	SLMAP	Q14BN4	828 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	PSMD6	Q15008	389 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	ZNF677	Q86XU0	584 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	SCYL3	Q8IZE3	742 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	BICD1	Q96G01	975 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	PLVAP	Q9BX97	442 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	POLR3F	Q9H1D9	316 aa	Predicted RBP	18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	ZNF112	Q9UJU3	913 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	ANAPC7	Q9UJX3	599 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	LCT	P09848	1927 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	CLDN3	O15551	220 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	RARG	P13631	454 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	MAPK4	P31152	587 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	DSG3	P32926	999 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	KCNJ1	P48048	391 aa		18.11	■□□□□ 0.49
TOM1-210	ENST00000449058	UBAP2	Q5T6F2	1119 aa	Known RBP	18.11	■□□□□ 0.49

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