RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 EIF2AQ9BY44 585 aaKnown RBP16.3■□□□□ 0.2
RAB5B-202ENST00000448789 PAK6Q9NQU5 681 aaPredicted RBP16.3■□□□□ 0.2
RAB5B-202ENST00000448789 TRMT1Q9NXH9 659 aaKnown RBP16.3■□□□□ 0.2
RAB5B-202ENST00000448789 ARHGAP20Q9P2F6 1191 aa16.3■□□□□ 0.2
RAB5B-202ENST00000448789 APEX2Q9UBZ4 518 aa16.3■□□□□ 0.2
RAB5B-202ENST00000448789 TRPV2Q9Y5S1 764 aa16.3■□□□□ 0.2
RAB5B-202ENST00000448789 NPTXRO95502 500 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 CHRNA1P02708 482 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 JAM2P57087 298 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 MGAT3Q09327 533 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 RAPGEF1Q13905 1077 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 ZACNQ401N2 412 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 SLC9C1Q4G0N8 1177 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 HGSNATQ68CP4 663 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 FAM228AQ86W67 206 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 EFCAB13Q8IY85 973 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 TMEM130Q8N3G9 435 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 FBXL13Q8NEE6 735 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 KAT5Q92993 513 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 GLT1D1Q96MS3 346 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 PI4K2AQ9BTU6 479 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 GPR88Q9GZN0 384 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 SPTLC3Q9NUV7 552 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 FBXL5Q9UKA1 691 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 DNAJC12Q9UKB3 198 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 PHF24Q9UPV7 400 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 NOC2LQ9Y3T9 749 aaKnown RBP16.29■□□□□ 0.2
RAB5B-202ENST00000448789 CCL5P13501 91 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 HSP90AA2PQ14568 343 aaPredicted RBP16.29■□□□□ 0.2
RAB5B-202ENST00000448789 TSR1Q2NL82 804 aaKnown RBP16.29■□□□□ 0.2
RAB5B-202ENST00000448789 TRIM71Q2Q1W2 868 aaKnown RBP16.29■□□□□ 0.2
RAB5B-202ENST00000448789 RPAINQ86UA6 219 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 CCAR2Q8N163 923 aaKnown RBP16.29■□□□□ 0.2
RAB5B-202ENST00000448789 DEFB118Q96PH6 123 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 SENP6Q9GZR1 1112 aaPredicted RBP16.29■□□□□ 0.2
RAB5B-202ENST00000448789 TRPV6Q9H1D0 765 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 RAB20Q9NX57 234 aa16.29■□□□□ 0.2
RAB5B-202ENST00000448789 A0A0U1RQJ8 604 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 HLA-DRAP01903 254 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 CLTAP09496 248 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 THPOP40225 353 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 ARID5AQ03989 594 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 CETN1Q12798 172 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 UBXN11Q5T124 520 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 SFMBT2Q5VUG0 894 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 SLC27A1Q6PCB7 646 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 WDR49Q8IV35 697 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 SLC43A3Q8NBI5 491 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 ARRDC4Q8NCT1 418 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 ACRBPQ8NEB7 543 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 ATRIPQ8WXE1 791 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 KREMEN1Q96MU8 473 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 SPAG5Q96R06 1193 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 MTMR12Q9C0I1 747 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 CXCL16Q9H2A7 254 aa16.28■□□□□ 0.2
RAB5B-202ENST00000448789 RPF1Q9H9Y2 349 aaKnown RBP16.28■□□□□ 0.2
RAB5B-202ENST00000448789 ZNHIT6Q9NWK9 470 aaKnown RBP16.28■□□□□ 0.2
RAB5B-202ENST00000448789 PIN4Q9Y237 131 aaKnown RBP16.28■□□□□ 0.2
RAB5B-202ENST00000448789 BRCA2P51587 3418 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 LACTBL1A8MY62 500 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 KBTBD13C9JR72 458 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 F8VZ95 297 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 NFICP08651 508 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 HSPA8P11142 646 aaKnown RBP16.27■□□□□ 0.2
RAB5B-202ENST00000448789 PIK3CAP42336 1068 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 CDK17Q00537 523 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 PTPN11Q06124 597 aaPredicted RBP16.27■□□□□ 0.2
RAB5B-202ENST00000448789 PTK7Q13308 1070 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 BIRC3Q13489 604 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 DRAP1Q14919 205 aaPredicted RBP16.27■□□□□ 0.2
RAB5B-202ENST00000448789 PCBP1Q15365 356 aaKnown RBP eCLIP16.27■□□□□ 0.21e-6■□□□□ 8.3
RAB5B-202ENST00000448789 ARHGAP44Q17R89 818 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 SLC10A6Q3KNW5 377 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 NOTUMQ6P988 496 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 RSPH3Q86UC2 560 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 HELQQ8TDG4 1101 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 SYN2Q92777 582 aaPredicted RBP16.27■□□□□ 0.2
RAB5B-202ENST00000448789 TATDN2Q93075 761 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 PPP1R13BQ96KQ4 1090 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 ADPGKQ9BRR6 497 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.2
RAB5B-202ENST00000448789 UBE2TQ9NPD8 197 aaPredicted RBP16.27■□□□□ 0.2
RAB5B-202ENST00000448789 STARD7Q9NQZ5 370 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 KCND1Q9NSA2 647 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 AIPL1Q9NZN9 384 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 PPP2R2CQ9Y2T4 447 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 REXO2Q9Y3B8 237 aaKnown RBP16.27■□□□□ 0.2
RAB5B-202ENST00000448789 HES2Q9Y543 173 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 ADGRG1Q9Y653 693 aa16.27■□□□□ 0.2
RAB5B-202ENST00000448789 ANK1P16157 1881 aa16.27■□□□□ 0.19
RAB5B-202ENST00000448789 M0QZ92 97 aa16.26■□□□□ 0.19
RAB5B-202ENST00000448789 B4GALT4O60513 344 aa16.26■□□□□ 0.19
RAB5B-202ENST00000448789 EIF4A3P38919 411 aaKnown RBP16.26■□□□□ 0.19
RAB5B-202ENST00000448789 GRM5P41594 1212 aa16.26■□□□□ 0.19
RAB5B-202ENST00000448789 TFAMQ00059 246 aaKnown RBP16.26■□□□□ 0.19
RAB5B-202ENST00000448789 ASIC2Q16515 512 aa16.26■□□□□ 0.19
RAB5B-202ENST00000448789 DCAF4L1Q3SXM0 396 aa16.26■□□□□ 0.19
RAB5B-202ENST00000448789 SPOPLQ6IQ16 392 aa16.26■□□□□ 0.19
RAB5B-202ENST00000448789 IRF2BP2Q7Z5L9 587 aa16.26■□□□□ 0.19
RAB5B-202ENST00000448789 REXO1L1PQ8IX06 675 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms