RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 NTHL1P78549 312 aa17.12■□□□□ 0.33
TRA2A-203ENST00000448549 ORC2Q13416 577 aaPredicted RBP17.12■□□□□ 0.33
TRA2A-203ENST00000448549 PPP2R5AQ15172 486 aa17.12■□□□□ 0.33
TRA2A-203ENST00000448549 TTC38Q5R3I4 469 aa17.12■□□□□ 0.33
TRA2A-203ENST00000448549 LIN9Q5TKA1 542 aa17.12■□□□□ 0.33
TRA2A-203ENST00000448549 BHMT2Q9H2M3 363 aa17.12■□□□□ 0.33
TRA2A-203ENST00000448549 FOXP1Q9H334 677 aaPredicted RBP17.12■□□□□ 0.33
TRA2A-203ENST00000448549 TBC1D17Q9HA65 648 aa17.12■□□□□ 0.33
TRA2A-203ENST00000448549 C8AP07357 584 aa17.11■□□□□ 0.33
TRA2A-203ENST00000448549 HNRNPA1P09651 372 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRA2A-203ENST00000448549 ELAVL2Q12926 359 aaKnown RBP17.11■□□□□ 0.33
TRA2A-203ENST00000448549 GLRA4Q5JXX5 417 aa17.11■□□□□ 0.33
TRA2A-203ENST00000448549 PPM1LQ5SGD2 360 aa17.11■□□□□ 0.33
TRA2A-203ENST00000448549 NT5DC1Q5TFE4 455 aa17.11■□□□□ 0.33
TRA2A-203ENST00000448549 HAUS3Q68CZ6 603 aa17.11■□□□□ 0.33
TRA2A-203ENST00000448549 IFT74Q96LB3 600 aa17.11■□□□□ 0.33
TRA2A-203ENST00000448549 LLPHQ9BRT6 129 aaKnown RBP17.11■□□□□ 0.33
TRA2A-203ENST00000448549 RPP25Q9BUL9 199 aaKnown RBP17.11■□□□□ 0.33
TRA2A-203ENST00000448549 POLIQ9UNA4 740 aa17.11■□□□□ 0.33
TRA2A-203ENST00000448549 PLXNA3P51805 1871 aa17.11■□□□□ 0.33
TRA2A-203ENST00000448549 MYO15AQ9UKN7 3530 aa17.11■□□□□ 0.33
TRA2A-203ENST00000448549 C2orf16Q68DN1 1984 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 CCL16O15467 120 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 B3GAT3O94766 335 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 MUTP22033 750 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 OR1D2P34982 312 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 RBM25P49756 843 aaKnown RBP17.1■□□□□ 0.33
TRA2A-203ENST00000448549 EFNA5P52803 228 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 GNL2Q13823 731 aaKnown RBP17.1■□□□□ 0.33
TRA2A-203ENST00000448549 NBR1Q14596 966 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 DCAF4L1Q3SXM0 396 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 ATF7IP2Q5U623 682 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 PDXDC1Q6P996 788 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 PARM1Q6UWI2 310 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.1■□□□□ 0.33
TRA2A-203ENST00000448549 C4orf32Q8N8J7 132 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 FBXO18Q8NFZ0 1043 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 KIFAP3Q92845 792 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 FGF14Q92915 247 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 ARHGEF3Q9NR81 526 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 LRWD1Q9UFC0 647 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 CDH7Q9ULB5 785 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 KIAA1024Q9UPX6 916 aa17.1■□□□□ 0.33
TRA2A-203ENST00000448549 ZFP37Q9Y6Q3 630 aaPredicted RBP17.1■□□□□ 0.33
TRA2A-203ENST00000448549 K7ERI5 159 aa17.09■□□□□ 0.33
TRA2A-203ENST00000448549 EIF5BO60841 1220 aaKnown RBP17.09■□□□□ 0.33
TRA2A-203ENST00000448549 FGFR3P22607 806 aa17.09■□□□□ 0.33
TRA2A-203ENST00000448549 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRA2A-203ENST00000448549 CLCNKBP51801 687 aa17.09■□□□□ 0.33
TRA2A-203ENST00000448549 RAB33AQ14088 237 aa17.09■□□□□ 0.33
TRA2A-203ENST00000448549 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
TRA2A-203ENST00000448549 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
TRA2A-203ENST00000448549 DCLRE1AQ6PJP8 1040 aa17.09■□□□□ 0.33
TRA2A-203ENST00000448549 ADSSL1Q8N142 457 aa17.09■□□□□ 0.33
TRA2A-203ENST00000448549 SLC7A14Q8TBB6 771 aa17.09■□□□□ 0.33
TRA2A-203ENST00000448549 FGF13Q92913 245 aa17.09■□□□□ 0.33
TRA2A-203ENST00000448549 SNX27Q96L92 541 aa17.09■□□□□ 0.33
TRA2A-203ENST00000448549 PPP1R10Q96QC0 940 aaKnown RBP17.09■□□□□ 0.33
TRA2A-203ENST00000448549 SLC2A4RGQ9NR83 387 aa17.09■□□□□ 0.33
TRA2A-203ENST00000448549 I3L4J1 428 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 XYLBO75191 536 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 DCNP07585 359 aaKnown RBP17.08■□□□□ 0.32
TRA2A-203ENST00000448549 HOXA9P31269 272 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 TRAPPC10P48553 1259 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 GPC5P78333 572 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 PHLDB3Q6NSJ2 640 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 CD300LGQ6UXG3 332 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 RSPO2Q6UXX9 243 aaPredicted RBP17.08■□□□□ 0.32
TRA2A-203ENST00000448549 ITFG1Q8TB96 612 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 GOLGA2P5Q9HBQ8 144 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 DDX19AQ9NUU7 478 aaKnown RBP17.08■□□□□ 0.32
TRA2A-203ENST00000448549 MTRRQ9UBK8 725 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 NOL7Q9UMY1 257 aaKnown RBP17.08■□□□□ 0.32
TRA2A-203ENST00000448549 TNFSF13BQ9Y275 285 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 SIT1Q9Y3P8 196 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 CDY1Q9Y6F8 540 aa17.08■□□□□ 0.32
TRA2A-203ENST00000448549 SMIM28A0A1B0GU29 152 aa17.07■□□□□ 0.32
TRA2A-203ENST00000448549 CCDC169A6NNP5 214 aa17.07■□□□□ 0.32
TRA2A-203ENST00000448549 TMEM189-UBE2V1I3L0A0 370 aa17.07■□□□□ 0.32
TRA2A-203ENST00000448549 TKTP29401 623 aaKnown RBP17.07■□□□□ 0.32
TRA2A-203ENST00000448549 HMGN5P82970 282 aaKnown RBP17.07■□□□□ 0.32
TRA2A-203ENST00000448549 PDIA5Q14554 519 aa17.07■□□□□ 0.32
TRA2A-203ENST00000448549 UPP1Q16831 310 aa17.07■□□□□ 0.32
TRA2A-203ENST00000448549 UVSSAQ2YD98 709 aa17.07■□□□□ 0.32
TRA2A-203ENST00000448549 APBB1IPQ7Z5R6 666 aaPredicted RBP17.07■□□□□ 0.32
TRA2A-203ENST00000448549 CEP120Q8N960 986 aa17.07■□□□□ 0.32
TRA2A-203ENST00000448549 FAM184AQ8NB25 1140 aa17.07■□□□□ 0.32
TRA2A-203ENST00000448549 C3orf58Q8NDZ4 430 aa17.07■□□□□ 0.32
TRA2A-203ENST00000448549 SNX29Q8TEQ0 813 aa17.07■□□□□ 0.32
TRA2A-203ENST00000448549 HCFC1R1Q9NWW0 138 aa17.07■□□□□ 0.32
TRA2A-203ENST00000448549 CFAP54Q96N23 3096 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 E9PMD0 336 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 TRAPPC3O43617 180 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 BRCC3P46736 316 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 NPTX2P47972 431 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 TOB1P50616 345 aaPredicted RBP17.06■□□□□ 0.32
TRA2A-203ENST00000448549 PEX3P56589 373 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 OSTNP61366 133 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 PTGDRQ13258 359 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 IGSF22Q8N9C0 903 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms