RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 FGFR1OPO95684 399 aaKnown RBP19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 EOMESO95936 686 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 AMHP03971 560 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 AFF1P51825 1210 aaKnown RBP19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 YARSP54577 528 aaKnown RBP19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 SPAG1Q07617 926 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 CLLU1OSQ5K130 101 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 FAM117BQ6P1L5 589 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 NPAS4Q8IUM7 802 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 HELQQ8TDG4 1101 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 FAM84AQ96KN4 292 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 SNX27Q96L92 541 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 CNOT6LQ96LI5 555 aaKnown RBP19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 MFSD14AQ96MC6 490 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 ZFP42Q96MM3 310 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 GAD1Q99259 594 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 MKNK1Q9BUB5 465 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 HSD3B7Q9H2F3 369 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 ELAC1Q9H777 363 aaKnown RBP19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 RSAD1Q9HA92 442 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 PDE11AQ9HCR9 933 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 TTC26A0AVF1 554 aa19.54■□□□□ 0.72
TRAPPC4-203ENST00000447216 MLH1P40692 756 aa19.54■□□□□ 0.72
TRAPPC4-203ENST00000447216 CDKAL1Q5VV42 579 aa19.54■□□□□ 0.72
TRAPPC4-203ENST00000447216 LMBRD2Q68DH5 695 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC4-203ENST00000447216 CRIPAKQ8N1N5 446 aa19.54■□□□□ 0.72
TRAPPC4-203ENST00000447216 CCDC127Q96BQ5 260 aa19.54■□□□□ 0.72
TRAPPC4-203ENST00000447216 BORCS6Q96GS4 357 aa19.54■□□□□ 0.72
TRAPPC4-203ENST00000447216 GDF15Q99988 308 aa19.54■□□□□ 0.72
TRAPPC4-203ENST00000447216 RBSNQ9H1K0 784 aa19.54■□□□□ 0.72
TRAPPC4-203ENST00000447216 INPP5FQ9Y2H2 1132 aa19.54■□□□□ 0.72
TRAPPC4-203ENST00000447216 GIT1Q9Y2X7 761 aa19.54■□□□□ 0.72
TRAPPC4-203ENST00000447216 COL4A6Q14031 1691 aa19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 MAPK13O15264 365 aa19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 TRIM49P0CI25 452 aa19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 TRIM49CP0CI26 452 aa19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 MLLT1Q03111 559 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 PPP2R3AQ06190 1150 aa19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 PSMD6Q15008 389 aa19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 SHHQ15465 462 aa19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 GLRA4Q5JXX5 417 aa19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 TMEM130Q8N3G9 435 aa19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 POP1Q99575 1024 aaKnown RBP19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 UBE2OQ9C0C9 1292 aaKnown RBP19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 TOPORSQ9NS56 1045 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 MIOSQ9NXC5 875 aa19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 ARMCX3Q9UH62 379 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC4-203ENST00000447216 ARL5CA6NH57 179 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 KCNJ18B7U540 433 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 OFD1O75665 1012 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 IL18RAPO95256 599 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 NFICP08651 508 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 DLATP10515 647 aaKnown RBP19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 KRT13P13646 458 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 MTIF2P46199 727 aaKnown RBP19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 SCNN1GP51170 649 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 VAMP7P51809 220 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 DLG4P78352 724 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 KCNJ12Q14500 433 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 HSP90AA2PQ14568 343 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 JADE1Q6IE81 842 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 ALKAL1Q6UXT8 129 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 FRMD5Q7Z6J6 570 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 FAM114A1Q8IWE2 563 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 TOP1MTQ969P6 601 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 ZMAT2Q96NC0 199 aaKnown RBP19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 RPS6KC1Q96S38 1066 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 MAGEC2Q9UBF1 373 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 PLAGL2Q9UPG8 496 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 SLC4A7Q9Y6M7 1214 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 KIAA1671Q9BY89 1806 aa19.52■□□□□ 0.72
TRAPPC4-203ENST00000447216 PTPRJQ12913 1337 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 LRRIQ3A6PVS8 624 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 GOLGA6L19H0YKK7 550 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 PTGESO14684 152 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 GNA14O95837 355 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 ATP1A3P13637 1013 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 ZNF18P17022 549 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 BFSP1Q12934 665 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 PAN2Q504Q3 1202 aaKnown RBP19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 XKR4Q5GH76 650 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 DCAF17Q5H9S7 520 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 C1orf220Q5T0J3 134 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 TCERG1LQ5VWI1 586 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 GLB1LQ6UWU2 654 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 INTS8Q75QN2 995 aaKnown RBP19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 EFCAB13Q8IY85 973 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 GSTCDQ8NEC7 633 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 TMC2Q8TDI7 906 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 PARD3BQ8TEW8 1205 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 KIF12Q96FN5 646 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 RNPC3Q96LT9 517 aaKnown RBP19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 MTIF3Q9H2K0 278 aaKnown RBP19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 PLEKHA5Q9HAU0 1116 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 UBN1Q9NPG3 1134 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 CNTN3Q9P232 1028 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 SCN1AP35498 2009 aa19.51■□□□□ 0.71
TRAPPC4-203ENST00000447216 SMIM28A0A1B0GU29 152 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 TBKBP1A7MCY6 615 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 POMCP01189 267 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms