RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 VCPKMTQ9H867 229 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 YY1AP1Q9H869 796 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 SETSIPP0DME0 302 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 VCLP18206 1134 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 EPHX2P34913 555 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 BBS9Q3SYG4 887 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 TDRD10Q5VZ19 366 aaKnown RBP12.38□□□□□ -0.43
FN1-212ENST00000446046 OSCP1Q8WVF1 389 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 MRPL46Q9H2W6 279 aaKnown RBP12.38□□□□□ -0.43
FN1-212ENST00000446046 SARS2Q9NP81 518 aaKnown RBP12.38□□□□□ -0.43
FN1-212ENST00000446046 FIS1Q9Y3D6 152 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 ZMYM2Q9UBW7 1377 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 POTEMA6NI47 508 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 SLC16A3O15427 465 aaKnown RBP12.38□□□□□ -0.43
FN1-212ENST00000446046 RGS4P49798 205 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 UGP2Q16851 508 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 PRR5LQ6MZQ0 368 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 C4orf22Q6V702 233 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 SGMS1Q86VZ5 419 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 ZNF564Q8TBZ8 553 aaPredicted RBP12.38□□□□□ -0.43
FN1-212ENST00000446046 DEFB129Q9H1M3 183 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 NSMCE4AQ9NXX6 385 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 ZNF70Q9UC06 446 aaPredicted RBP12.38□□□□□ -0.43
FN1-212ENST00000446046 PI16Q6UXB8 463 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 CHCHD3Q9NX63 227 aaKnown RBP12.38□□□□□ -0.43
FN1-212ENST00000446046 PCDHB12Q9Y5F1 795 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 NEDD4P46934 1319 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 MYH4Q9Y623 1939 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 LMNAP02545 664 aaKnown RBP12.38□□□□□ -0.43
FN1-212ENST00000446046 EMBQ6PCB8 327 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 NT5DC4Q86YG4 428 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 ATPAF2Q8N5M1 289 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 MAML1Q92585 1016 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 APOBEC2Q9Y235 224 aaKnown RBP12.38□□□□□ -0.43
FN1-212ENST00000446046 KRT31Q15323 416 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 ZNF746Q6NUN9 644 aaPredicted RBP12.38□□□□□ -0.43
FN1-212ENST00000446046 NSUN4Q96CB9 384 aaKnown RBP12.38□□□□□ -0.43
FN1-212ENST00000446046 TRIM55Q9BYV6 548 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 SLC25A13Q9UJS0 675 aa12.38□□□□□ -0.43
FN1-212ENST00000446046 ZNF543Q08ER8 600 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 NCLNQ969V3 563 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 PLEKHA4Q9H4M7 779 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 DHX35Q9H5Z1 703 aaKnown RBP12.37□□□□□ -0.43
FN1-212ENST00000446046 RTN2O75298 545 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 OOSP2Q86WS3 158 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 SLC26A7Q8TE54 656 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 RAPGEF5Q92565 580 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 RUBCNQ92622 972 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 SKA1Q96BD8 255 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 NT5C1AQ9BXI3 368 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 SIK2Q9H0K1 926 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 SYNDIG1Q9H7V2 258 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 PLEKHA5Q9HAU0 1116 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 OR1G1P47890 313 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 SLC26A2P50443 739 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 NCKAP1LP55160 1127 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 RBBP7Q16576 425 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 UNC45AQ9H3U1 944 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 A0A087WUV0 522 aaPredicted RBP12.37□□□□□ -0.43
FN1-212ENST00000446046 PSMD14O00487 310 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 HIST1H2AGP0C0S8 130 aaPredicted RBP12.37□□□□□ -0.43
FN1-212ENST00000446046 HIST1H2ADP20671 130 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 AARSP49588 968 aaKnown RBP eCLIP12.37□□□□□ -0.43
FN1-212ENST00000446046 DHX9Q08211 1270 aaKnown RBP12.37□□□□□ -0.43
FN1-212ENST00000446046 ADCY1Q08828 1119 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 KCNB1Q14721 858 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 POLD3Q15054 466 aaPredicted RBP12.37□□□□□ -0.43
FN1-212ENST00000446046 HIST1H2AHQ96KK5 128 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 HIST1H2AJQ99878 128 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 H2AFJQ9BTM1 129 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 RGPD8O14715 1765 aaPredicted RBP12.37□□□□□ -0.43
FN1-212ENST00000446046 PARP4Q9UKK3 1724 aaKnown RBP12.37□□□□□ -0.43
FN1-212ENST00000446046 LCP1P13796 627 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 NPEPPSP55786 919 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 GRIN1Q05586 938 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 UGT3A1Q6NUS8 523 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 CD302Q8IX05 232 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 BCAS4Q8TDM0 211 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 MANSC4A6NHS7 340 aaPredicted RBP12.37□□□□□ -0.43
FN1-212ENST00000446046 ADORA2BP29275 332 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 MAPRE2Q15555 327 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 PHLPP1O60346 1717 aa12.37□□□□□ -0.43
FN1-212ENST00000446046 UBA6A0AVT1 1052 aaPredicted RBP12.36□□□□□ -0.43
FN1-212ENST00000446046 TLR2O60603 784 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
FN1-212ENST00000446046 ABCE1P61221 599 aaKnown RBP12.36□□□□□ -0.43
FN1-212ENST00000446046 RASSF3Q86WH2 238 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 VSTM4Q8IW00 320 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 ECT2Q9H8V3 914 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 KRT82Q9NSB4 513 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 NMRK1Q9NWW6 199 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 AIPL1Q9NZN9 384 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.36□□□□□ -0.43
FN1-212ENST00000446046 ASMTLO95671 621 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 APOA4P06727 396 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 EXT2Q93063 718 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 NYAP2Q9P242 653 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 TBK1Q9UHD2 729 aa12.36□□□□□ -0.43
FN1-212ENST00000446046 GRID2IPA4D2P6 1211 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms