RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 CA8P35219 290 aa13.36□□□□□ -0.27
LTBR-204ENST00000444814 OSTNP61366 133 aa13.36□□□□□ -0.27
LTBR-204ENST00000444814 CREMQ03060 361 aa13.36□□□□□ -0.27
LTBR-204ENST00000444814 FAM160A1Q05DH4 1040 aa13.36□□□□□ -0.27
LTBR-204ENST00000444814 PDXDC1Q6P996 788 aa13.36□□□□□ -0.27
LTBR-204ENST00000444814 PPM1EQ8WY54 764 aa13.36□□□□□ -0.27
LTBR-204ENST00000444814 IGSF21Q96ID5 467 aa13.36□□□□□ -0.27
LTBR-204ENST00000444814 ZFP42Q96MM3 310 aa13.36□□□□□ -0.27
LTBR-204ENST00000444814 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
LTBR-204ENST00000444814 KIAA1586Q9HCI6 787 aa13.36□□□□□ -0.27
LTBR-204ENST00000444814 AGO2Q9UKV8 859 aaKnown RBP13.36□□□□□ -0.27
LTBR-204ENST00000444814 A0A0B4J269 797 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 TTLL13PA6NNM8 815 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 GRM6O15303 877 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 TADA2AO75478 443 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 PPP1R37O75864 691 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 KCNE1P15382 129 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 SLC11A1P49279 550 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 DSC1Q08554 894 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 CCDC85BQ15834 202 aaPredicted RBP13.35□□□□□ -0.27
LTBR-204ENST00000444814 ZC2HC1CQ53FD0 456 aaPredicted RBP13.35□□□□□ -0.27
LTBR-204ENST00000444814 KIAA1841Q6NSI8 718 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 ARMCX5Q6P1M9 558 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 COLGALT2Q8IYK4 626 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 SNX27Q96L92 541 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 TIGD1Q96MW7 591 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 GBP4Q96PP9 640 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 FIZ1Q96SL8 496 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 EMILIN2Q9BXX0 1053 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 DPP7Q9UHL4 492 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 FAM50BQ9Y247 325 aa13.35□□□□□ -0.27
LTBR-204ENST00000444814 SF3B1O75533 1304 aaKnown RBP eCLIP13.34□□□□□ -0.27
LTBR-204ENST00000444814 MYH11P35749 1972 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.34□□□□□ -0.27
LTBR-204ENST00000444814 ARHGEF37A1IGU5 675 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 NRP1O14786 923 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 IL18RAPO95256 599 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 URODP06132 367 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 RPL9P32969 192 aaKnown RBP13.34□□□□□ -0.27
LTBR-204ENST00000444814 SURF1Q15526 300 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 PPFIBP1Q86W92 1011 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 NT5DC4Q86YG4 428 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 ZNF280BQ86YH2 543 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 GPR65Q8IYL9 337 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 HLA-CQ95604 372 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 TCF25Q9BQ70 676 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 STRA6Q9BX79 667 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 BLZF1Q9H2G9 400 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 ASB7Q9H672 318 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 TLE6Q9H808 572 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 CNTN3Q9P232 1028 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 THEGQ9P2T0 379 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 USP20Q9Y2K6 914 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 PRG3Q9Y2Y8 225 aaPredicted RBP13.34□□□□□ -0.27
LTBR-204ENST00000444814 DERAQ9Y315 318 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 R3HCC1Q9Y3T6 440 aaKnown RBP13.34□□□□□ -0.27
LTBR-204ENST00000444814 STYXL1Q9Y6J8 313 aa13.34□□□□□ -0.27
LTBR-204ENST00000444814 FNDC1Q4ZHG4 1894 aaPredicted RBP13.34□□□□□ -0.27
LTBR-204ENST00000444814 SMIM28A0A1B0GU29 152 aa13.33□□□□□ -0.28
LTBR-204ENST00000444814 DDHD2O94830 711 aa13.33□□□□□ -0.28
LTBR-204ENST00000444814 RPN1P04843 607 aaKnown RBP13.33□□□□□ -0.28
LTBR-204ENST00000444814 EDN1P05305 212 aa13.33□□□□□ -0.28
LTBR-204ENST00000444814 CUL4BQ13620 913 aa13.33□□□□□ -0.28
LTBR-204ENST00000444814 PUS10Q3MIT2 529 aaKnown RBP13.33□□□□□ -0.28
LTBR-204ENST00000444814 XKR4Q5GH76 650 aa13.33□□□□□ -0.28
LTBR-204ENST00000444814 DCLRE1AQ6PJP8 1040 aa13.33□□□□□ -0.28
LTBR-204ENST00000444814 SPRED2Q7Z698 418 aa13.33□□□□□ -0.28
LTBR-204ENST00000444814 VPS52Q8N1B4 723 aa13.33□□□□□ -0.28
LTBR-204ENST00000444814 BEST2Q8NFU1 509 aa13.33□□□□□ -0.28
LTBR-204ENST00000444814 ZBTB45Q96K62 511 aaPredicted RBP13.33□□□□□ -0.28
LTBR-204ENST00000444814 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.33□□□□□ -0.28
LTBR-204ENST00000444814 MRPL17Q9NRX2 175 aaKnown RBP13.33□□□□□ -0.28
LTBR-204ENST00000444814 DNAJB4Q9UDY4 337 aa13.33□□□□□ -0.28
LTBR-204ENST00000444814 ADAM28Q9UKQ2 775 aa13.33□□□□□ -0.28
LTBR-204ENST00000444814 UBQLN1Q9UMX0 589 aaKnown RBP13.33□□□□□ -0.28
LTBR-204ENST00000444814 NT5C1B-RDH14C9J2C7 533 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 ABLIM1O14639 778 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 PRPF6O94906 941 aaKnown RBP13.32□□□□□ -0.28
LTBR-204ENST00000444814 MYBP10242 640 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 CTSAP10619 480 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 CYP3A5P20815 502 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 PPP1R2P41236 205 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 UBE2HP62256 183 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 KCNB1Q14721 858 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 USP41Q3LFD5 358 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 TCEAL5Q5H9L2 206 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 ELOA2Q8IYF1 753 aaPredicted RBP13.32□□□□□ -0.28
LTBR-204ENST00000444814 ZNF507Q8TCN5 953 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 CACTINQ8WUQ7 758 aaKnown RBP13.32□□□□□ -0.28
LTBR-204ENST00000444814 ATXN2LQ8WWM7 1075 aaKnown RBP13.32□□□□□ -0.28
LTBR-204ENST00000444814 KIF12Q96FN5 646 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 HERC2P3Q9BVR0 1158 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 HCSTQ9UBK5 93 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 NUB1Q9Y5A7 615 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 NLRC5Q86WI3 1866 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 TMEM189-UBE2V1I3L0A0 370 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 PTGESO14684 152 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 EXTL3O43909 919 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 CXCL14O95715 111 aa13.32□□□□□ -0.28
LTBR-204ENST00000444814 SOD2P04179 222 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms