RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 PHLDB3Q6NSJ2 640 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 FBXO16Q8IX29 292 aaPredicted RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 WHAMMQ8TF30 809 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 PIH1D1Q9NWS0 290 aaKnown RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 CHMP2BQ9UQN3 213 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 TADA3O75528 432 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 GJB6O95452 261 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 CBWD2Q8IUF1 395 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 BBS5Q8N3I7 341 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 SEPT5Q99719 369 aaPredicted RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 C10orf88Q9H8K7 445 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 MEGF6O75095 1541 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 C6orf118Q5T5N4 469 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 OR6P1Q8NGX9 317 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 CRAMP1Q96RY5 1269 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 MXRA8Q9BRK3 442 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 ALDH8A1Q9H2A2 487 aaPredicted RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 PNMA3Q9UL41 463 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 PXDNQ92626 1479 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 IQANK1A0A1B0GTG1 560 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 TYW5A2RUC4 315 aaKnown RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 SEC24CP53992 1094 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 TRIM28Q13263 835 aaKnown RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 NCOA4Q13772 614 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 APOBEC3FQ8IUX4 373 aaKnown RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 ZSWIM2Q8NEG5 633 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 NUDT12Q9BQG2 462 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 APEX2Q9UBZ4 518 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 IP6K2Q9UHH9 426 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 A0A087X0B3 334 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 CTIFO43310 598 aaKnown RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 DGKIO75912 1065 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 SBK1Q52WX2 424 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 HEATR6Q6AI08 1181 aaKnown RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 ZNF513Q8N8E2 541 aaPredicted RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 SYT2Q8N9I0 419 aaPredicted RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 LRRN4Q8WUT4 740 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 SEMA6BQ9H3T3 888 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 PDGFRAP16234 1089 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 ALS2CLQ60I27 953 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 ATP11CQ8NB49 1132 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 C1orf131Q8NDD1 294 aaKnown RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 TRAPPC12Q8WVT3 735 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 PGBD4Q96DM1 585 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 ZFP69BQ9UJL9 534 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 WDR19Q8NEZ3 1342 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 CPA2P48052 419 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 KRT33BQ14525 404 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 MXD4Q14582 209 aaPredicted RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 DDX4Q9NQI0 724 aaKnown RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 NDFIP2Q9NV92 336 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 TIMM13Q9Y5L4 95 aaPredicted RBP8.47□□□□□ -1.05
RIF1-205ENST00000444746 RHOBTB3O94955 611 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 SFNP31947 248 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 AVPR1AP37288 418 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 TSPY1Q01534 308 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 PTPAQ15257 358 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 RBBP7Q16576 425 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 PROM2Q8N271 834 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 DTX3LQ8TDB6 740 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 RMDN1Q96DB5 314 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 CEP41Q9BYV8 373 aa8.47□□□□□ -1.05
RIF1-205ENST00000444746 ZBTB24O43167 697 aaPredicted RBP8.46□□□□□ -1.05
RIF1-205ENST00000444746 SYF2O95926 243 aaKnown RBP8.46□□□□□ -1.05
RIF1-205ENST00000444746 ITGB3P05106 788 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 EEF1B2P24534 225 aaKnown RBP8.46□□□□□ -1.05
RIF1-205ENST00000444746 SHROOM1Q2M3G4 852 aaPredicted RBP8.46□□□□□ -1.05
RIF1-205ENST00000444746 GOLGA7BQ2TAP0 167 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 BTBD8Q5XKL5 378 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 EXOC8Q8IYI6 725 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 KIF2BQ8N4N8 673 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 CCDC124Q96CT7 223 aaKnown RBP8.46□□□□□ -1.05
RIF1-205ENST00000444746 HVCN1Q96D96 273 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 TTC1Q99614 292 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 C7orf25Q9BPX7 421 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 CBWD1Q9BRT8 395 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 SP110Q9HB58 689 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 NYAP2Q9P242 653 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 PRG3Q9Y2Y8 225 aaPredicted RBP8.46□□□□□ -1.05
RIF1-205ENST00000444746 KRT10P13645 584 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 PPP2R2AP63151 447 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 TNFAIP2Q03169 654 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 LY6KQ17RY6 165 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 GPAT2Q6NUI2 795 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 NCLNQ969V3 563 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 SNX12Q9UMY4 172 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 NEXMIFQ5QGS0 1516 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.46□□□□□ -1.05
RIF1-205ENST00000444746 PEX10O60683 326 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 ADCY2Q08462 1091 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 MAP7Q14244 749 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.46□□□□□ -1.05
RIF1-205ENST00000444746 RFFLQ8WZ73 363 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 RBM41Q96IZ5 413 aaKnown RBP8.46□□□□□ -1.05
RIF1-205ENST00000444746 FAM161BQ96MY7 647 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 PNKPQ96T60 521 aa8.46□□□□□ -1.05
RIF1-205ENST00000444746 TAF1DQ9H5J8 278 aaPredicted RBP8.46□□□□□ -1.05
RIF1-205ENST00000444746 ESRRBO95718 433 aa8.46□□□□□ -1.06
RIF1-205ENST00000444746 PLIN5Q00G26 463 aa8.46□□□□□ -1.06
RIF1-205ENST00000444746 FASTKD1Q53R41 847 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms