RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 DNAJC19Q96DA6 116 aa20.38■□□□□ 0.85
CCDC188-202ENST00000444532 NECAB3Q96P71 396 aaPredicted RBP20.38■□□□□ 0.85
CCDC188-202ENST00000444532 PPP1R10Q96QC0 940 aaKnown RBP20.38■□□□□ 0.85
CCDC188-202ENST00000444532 EMILIN2Q9BXX0 1053 aa20.38■□□□□ 0.85
CCDC188-202ENST00000444532 LRRC27Q9C0I9 530 aa20.38■□□□□ 0.85
CCDC188-202ENST00000444532 PRKAG3Q9UGI9 489 aa20.38■□□□□ 0.85
CCDC188-202ENST00000444532 CITO14578 2027 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 SMIM28A0A1B0GU29 152 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 F8W810 466 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 URODP06132 367 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 HOXB8P17481 243 aaPredicted RBP20.37■□□□□ 0.85
CCDC188-202ENST00000444532 NMT1P30419 496 aaKnown RBP20.37■□□□□ 0.85
CCDC188-202ENST00000444532 MATR3P43243 847 aaKnown RBP eCLIP20.37■□□□□ 0.85
CCDC188-202ENST00000444532 ME1P48163 572 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 LIG4P49917 911 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 RBM10P98175 930 aaKnown RBP20.37■□□□□ 0.85
CCDC188-202ENST00000444532 LLGL2Q6P1M3 1020 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 SHC4Q6S5L8 630 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 TAS1R1Q7RTX1 841 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 ZNF720Q7Z2F6 126 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 PPFIBP1Q86W92 1011 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 GPR65Q8IYL9 337 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 CASP10Q92851 521 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 CHST7Q9NS84 486 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 SLC38A7Q9NVC3 462 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 PCDHA7Q9UN72 937 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 ZDHHC9Q9Y397 364 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 HCFC2Q9Y5Z7 792 aa20.37■□□□□ 0.85
CCDC188-202ENST00000444532 TTC28Q96AY4 2481 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 CASTOR2A6NHX0 329 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 HNRNPDLO14979 420 aaKnown RBP20.36■□□□□ 0.85
CCDC188-202ENST00000444532 HARSP12081 509 aaKnown RBP20.36■□□□□ 0.85
CCDC188-202ENST00000444532 KCNE1P15382 129 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 GLUD2P49448 558 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 DSG1Q02413 1049 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 E2F4Q16254 413 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 KYAT1Q16773 422 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 KIAA0319Q5VV43 1072 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 ANKRD54Q6NXT1 300 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 FUT10Q6P4F1 479 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 SFR1Q86XK3 245 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 MAP4K3Q8IVH8 894 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 IQUBQ8NA54 791 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 RABGGTAQ92696 567 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 HVCN1Q96D96 273 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 SNX27Q96L92 541 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 UROC1Q96N76 676 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 PAAF1Q9BRP4 392 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 GPR62Q9BZJ7 368 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 TNMDQ9H2S6 317 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 ATP6V1DQ9Y5K8 247 aa20.36■□□□□ 0.85
CCDC188-202ENST00000444532 SF3B1O75533 1304 aaKnown RBP eCLIP20.35■□□□□ 0.85
CCDC188-202ENST00000444532 AMPD3Q01432 767 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 USP41Q3LFD5 358 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 GLRA4Q5JXX5 417 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 KIAA1841Q6NSI8 718 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 SLC22A17Q8WUG5 538 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 KLHL5Q96PQ7 755 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 HAPLN2Q9GZV7 340 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 MRPL44Q9H9J2 332 aaKnown RBP20.35■□□□□ 0.85
CCDC188-202ENST00000444532 PLEKHA5Q9HAU0 1116 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 OLFML3Q9NRN5 406 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 KBTBD4Q9NVX7 518 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 FAM13BQ9NYF5 915 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 CNTN3Q9P232 1028 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 CACNG4Q9UBN1 327 aa20.35■□□□□ 0.85
CCDC188-202ENST00000444532 BDP1A6H8Y1 2624 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 A0A0B4J269 797 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 FRMD3A2A2Y4 597 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 TMEM189-UBE2V1I3L0A0 370 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 C2CD2LO14523 706 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 CLTAP09496 248 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 CNPP09543 421 aaKnown RBP20.34■□□□□ 0.85
CCDC188-202ENST00000444532 IDEP14735 1019 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 KLRC2P26717 231 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 ELAVL2Q12926 359 aaKnown RBP20.34■□□□□ 0.85
CCDC188-202ENST00000444532 SLC10A6Q3KNW5 377 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 TPRNQ4KMQ1 711 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 ZC2HC1CQ53FD0 456 aaPredicted RBP20.34■□□□□ 0.85
CCDC188-202ENST00000444532 RESP18Q5W5W9 173 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 DCLRE1AQ6PJP8 1040 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 DHX58Q96C10 678 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 DDX27Q96GQ7 796 aaKnown RBP20.34■□□□□ 0.85
CCDC188-202ENST00000444532 STRA6Q9BX79 667 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 S1PR5Q9H228 398 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 RXFP1Q9HBX9 757 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 PANK4Q9NVE7 773 aa20.34■□□□□ 0.85
CCDC188-202ENST00000444532 NCOR1O75376 2440 aa20.33■□□□□ 0.85
CCDC188-202ENST00000444532 OGTO15294 1046 aa20.33■□□□□ 0.85
CCDC188-202ENST00000444532 PPP1R37O75864 691 aa20.33■□□□□ 0.85
CCDC188-202ENST00000444532 KIF4AO95239 1232 aa20.33■□□□□ 0.85
CCDC188-202ENST00000444532 KRT85P78386 507 aa20.33■□□□□ 0.85
CCDC188-202ENST00000444532 UPP1Q16831 310 aa20.33■□□□□ 0.85
CCDC188-202ENST00000444532 HERC4Q5GLZ8 1057 aaPredicted RBP20.33■□□□□ 0.85
CCDC188-202ENST00000444532 SLFN12LQ6IEE8 588 aa20.33■□□□□ 0.85
CCDC188-202ENST00000444532 SYCE2Q6PIF2 218 aa20.33■□□□□ 0.85
CCDC188-202ENST00000444532 ADHFE1Q8IWW8 467 aa20.33■□□□□ 0.85
CCDC188-202ENST00000444532 CCDC65Q8IXS2 484 aa20.33■□□□□ 0.85
CCDC188-202ENST00000444532 ZMAT2Q96NC0 199 aaKnown RBP20.33■□□□□ 0.85
CCDC188-202ENST00000444532 PYM1Q9BRP8 204 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms