RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 RAPGEFL1Q9UHV5 662 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 ODF2LQ9ULJ1 636 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 PRR33A8MZF0 331 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 FAM13AO94988 1023 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 MAPTP10636 758 aaKnown RBP22■■□□□ 1.11
LRCH3-208ENST00000443727 ELAVL2Q12926 359 aaKnown RBP22■■□□□ 1.11
LRCH3-208ENST00000443727 MCM6Q14566 821 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 FAM171A1Q5VUB5 890 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 FAM173BQ6P4H8 233 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 CEP57Q86XR8 500 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 PALB2Q86YC2 1186 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 MYCT1Q8N699 235 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 CEP120Q8N960 986 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 RAD54LQ92698 747 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 BICD1Q96G01 975 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 ACAP3Q96P50 834 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 REEP2Q9BRK0 252 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 ZHX3Q9H4I2 956 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 MAN1C1Q9NR34 630 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 HCN4Q9Y3Q4 1203 aa22■■□□□ 1.11
LRCH3-208ENST00000443727 TBCAO75347 108 aaKnown RBP21.99■■□□□ 1.11
LRCH3-208ENST00000443727 MYBP10242 640 aa21.99■■□□□ 1.11
LRCH3-208ENST00000443727 TXLNAP40222 546 aa21.99■■□□□ 1.11
LRCH3-208ENST00000443727 NAB2Q15742 525 aa21.99■■□□□ 1.11
LRCH3-208ENST00000443727 SPECC1Q5M775 1068 aa21.99■■□□□ 1.11
LRCH3-208ENST00000443727 GLYCTKQ8IVS8 523 aa21.99■■□□□ 1.11
LRCH3-208ENST00000443727 GPR65Q8IYL9 337 aa21.99■■□□□ 1.11
LRCH3-208ENST00000443727 PPP1R10Q96QC0 940 aaKnown RBP21.99■■□□□ 1.11
LRCH3-208ENST00000443727 TTPALQ9BTX7 342 aa21.99■■□□□ 1.11
LRCH3-208ENST00000443727 CCDC39Q9UFE4 941 aa21.99■■□□□ 1.11
LRCH3-208ENST00000443727 MTMR6Q9Y217 621 aa21.99■■□□□ 1.11
LRCH3-208ENST00000443727 SMIM28A0A1B0GU29 152 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 STX6O43752 255 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 TOM1L1O75674 476 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 B3GAT3O94766 335 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 HSP90AA1P07900 732 aaKnown RBP21.98■■□□□ 1.11
LRCH3-208ENST00000443727 SPATA31D3P0C874 917 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 PROZP22891 400 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 NOLC1Q14978 699 aaKnown RBP eCLIP21.98■■□□□ 1.11
LRCH3-208ENST00000443727 PTPAQ15257 358 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 SPATA31D4Q6ZUB0 917 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 HAUS6Q7Z4H7 955 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 GPR149Q86SP6 731 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 LARP4BQ92615 738 aaKnown RBP21.98■■□□□ 1.11
LRCH3-208ENST00000443727 EDAQ92838 391 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 EPSTI1Q96J88 318 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 ZBTB45Q96K62 511 aaPredicted RBP21.98■■□□□ 1.11
LRCH3-208ENST00000443727 UROC1Q96N76 676 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 CCSER1Q9C0I3 900 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 ZSCAN16Q9H4T2 348 aaPredicted RBP21.98■■□□□ 1.11
LRCH3-208ENST00000443727 PARVGQ9HBI0 331 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 BLOC1S4Q9NUP1 217 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 SLC38A7Q9NVC3 462 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 FNIP2Q9P278 1114 aa21.98■■□□□ 1.11
LRCH3-208ENST00000443727 CLDN3O15551 220 aa21.97■■□□□ 1.11
LRCH3-208ENST00000443727 RPL17P18621 184 aaKnown RBP21.97■■□□□ 1.11
LRCH3-208ENST00000443727 NCKAP1LP55160 1127 aa21.97■■□□□ 1.11
LRCH3-208ENST00000443727 RTP2Q5QGT7 225 aa21.97■■□□□ 1.11
LRCH3-208ENST00000443727 DCLRE1AQ6PJP8 1040 aa21.97■■□□□ 1.11
LRCH3-208ENST00000443727 PRSS55Q6UWB4 352 aaPredicted RBP21.97■■□□□ 1.11
LRCH3-208ENST00000443727 ZPBP2Q6X784 338 aa21.97■■□□□ 1.11
LRCH3-208ENST00000443727 HSCBQ8IWL3 235 aa21.97■■□□□ 1.11
LRCH3-208ENST00000443727 TDRD5Q8NAT2 981 aaKnown RBP21.97■■□□□ 1.11
LRCH3-208ENST00000443727 LRRC15Q8TF66 581 aa21.97■■□□□ 1.11
LRCH3-208ENST00000443727 FBXO2Q9UK22 296 aaPredicted RBP21.97■■□□□ 1.11
LRCH3-208ENST00000443727 SRPRBQ9Y5M8 271 aaKnown RBP21.97■■□□□ 1.11
LRCH3-208ENST00000443727 C2CD4DB7Z1M9 353 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 K7ENM7 598 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 TRAPPC3O43617 180 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 BRD1O95696 1058 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 SCP2P22307 547 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 DDIT3P35638 169 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 CLCNKBP51801 687 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 PDXDC1Q6P996 788 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 SNX21Q969T3 373 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 DDX27Q96GQ7 796 aaKnown RBP21.96■■□□□ 1.11
LRCH3-208ENST00000443727 SNX27Q96L92 541 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 CLIC6Q96NY7 704 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 GOLGA2P5Q9HBQ8 144 aa21.96■■□□□ 1.11
LRCH3-208ENST00000443727 CCDC195A0A1B0GUA6 201 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 ABLIM1O14639 778 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 HNRNPDLO14979 420 aaKnown RBP21.95■■□□□ 1.1
LRCH3-208ENST00000443727 TGM5O43548 720 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 LIG4P49917 911 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 ZXDAP98168 799 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 PSMD5Q16401 504 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 RRAGBQ5VZM2 374 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 ALKAL1Q6UXT8 129 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 C15orf39Q6ZRI6 1047 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 CCDC149Q6ZUS6 474 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 USP49Q70CQ1 688 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 KRI1Q8N9T8 703 aaKnown RBP21.95■■□□□ 1.1
LRCH3-208ENST00000443727 HDAC7Q8WUI4 952 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 PIK3R5Q8WYR1 880 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 PLEKHA4Q9H4M7 779 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 TBX20Q9UMR3 447 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 GTF3C3Q9Y5Q9 886 aa21.95■■□□□ 1.1
LRCH3-208ENST00000443727 TMEM189-UBE2V1I3L0A0 370 aa21.94■■□□□ 1.1
LRCH3-208ENST00000443727 TRAK2O60296 914 aa21.94■■□□□ 1.1
LRCH3-208ENST00000443727 ZNF131P52739 623 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms