RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 RRP12Q5JTH9 1297 aaKnown RBP6.19□□□□□ -1.42
VPS50-206ENST00000443443 RNF219Q5W0B1 726 aaPredicted RBP6.19□□□□□ -1.42
VPS50-206ENST00000443443 ZNF572Q7Z3I7 529 aaPredicted RBP6.19□□□□□ -1.42
VPS50-206ENST00000443443 SPATS2Q86XZ4 545 aaKnown RBP6.19□□□□□ -1.42
VPS50-206ENST00000443443 GPR150Q8NGU9 434 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 ORAI2Q96SN7 254 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 WDR11Q9BZH6 1224 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 LDAHQ9H6V9 325 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 DNM3Q9UQ16 869 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 ATP11BQ9Y2G3 1177 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 MAP3K2Q9Y2U5 619 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 CHST2Q9Y4C5 530 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 HS3ST4Q9Y661 456 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 WASHC2AQ641Q2 1341 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 PLEKHD1A6NEE1 506 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 UNC119BA6NIH7 251 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 PJA2O43164 708 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 PPFIA2O75334 1257 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 IL2RBP14784 551 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 USP14P54578 494 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 MXRA7P84157 204 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 MALLQ13021 153 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 CLUL1Q15846 466 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 GJC2Q5T442 439 aaPredicted RBP6.18□□□□□ -1.42
VPS50-206ENST00000443443 TSHZ3Q63HK5 1081 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 MED25Q71SY5 747 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 DNAJC10Q8IXB1 793 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 CMTR2Q8IYT2 770 aaKnown RBP6.18□□□□□ -1.42
VPS50-206ENST00000443443 PPM1NQ8N819 430 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 CPEB3Q8NE35 698 aaKnown RBP6.18□□□□□ -1.42
VPS50-206ENST00000443443 SLC2A13Q96QE2 648 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 MRI1Q9BV20 369 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 SERHL2Q9H4I8 314 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 MOCS1Q9NZB8 636 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 PACSIN3Q9UKS6 424 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 PRKAB1Q9Y478 270 aa6.18□□□□□ -1.42
VPS50-206ENST00000443443 TMEM200CA6NKL6 621 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 VIL1P09327 827 aaKnown RBP6.17□□□□□ -1.42
VPS50-206ENST00000443443 ALOX15P16050 662 aaPredicted RBP6.17□□□□□ -1.42
VPS50-206ENST00000443443 BMP5P22003 454 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 DDX6P26196 483 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS50-206ENST00000443443 SREBF1P36956 1147 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 GUCY1B3Q02153 619 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 RESTQ13127 1097 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 ANO4Q32M45 955 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 FAM102AQ5T9C2 384 aaPredicted RBP6.17□□□□□ -1.42
VPS50-206ENST00000443443 AFMIDQ63HM1 303 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 AMOTL1Q8IY63 956 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 SUPT20HQ8NEM7 779 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 REXO4Q9GZR2 422 aaKnown RBP6.17□□□□□ -1.42
VPS50-206ENST00000443443 CCM2LQ9NUG4 571 aaPredicted RBP6.17□□□□□ -1.42
VPS50-206ENST00000443443 TMEM140Q9NV12 185 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 RNF181Q9P0P0 153 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 FPGT-TNNI3KV9GXZ4 949 aa6.17□□□□□ -1.42
VPS50-206ENST00000443443 POMCP01189 267 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 ATP5JP18859 108 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 BMPR1AP36894 532 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 ZEB1P37275 1124 aaPredicted RBP6.16□□□□□ -1.42
VPS50-206ENST00000443443 MCAMP43121 646 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 PPP3CAQ08209 521 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 SP140Q13342 867 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 BEAN1Q3B7T3 259 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 HECTD2Q5U5R9 776 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 ARHGEF19Q8IW93 802 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 CCHCR1Q8TD31 782 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 CRAMP1Q96RY5 1269 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 LANCL2Q9NS86 450 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 SCOCQ9UIL1 159 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 AJAP1Q9UKB5 411 aaPredicted RBP6.16□□□□□ -1.42
VPS50-206ENST00000443443 PNPLA7Q6ZV29 1317 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 COL4A3Q01955 1670 aa6.16□□□□□ -1.42
VPS50-206ENST00000443443 WNT10BO00744 389 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 ENDOD1O94919 500 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 NANOS3P60323 173 aaKnown RBP6.15□□□□□ -1.42
VPS50-206ENST00000443443 TAP1Q03518 808 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 UBXN2BQ14CS0 331 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 SPDYE7PQ495Y7 208 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 EGFLAMQ63HQ2 1017 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 PCSK4Q6UW60 755 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 BEND2Q8NDZ0 799 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 OR56A1Q8NGH5 318 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 CAVIN3Q969G5 261 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 FAM126AQ9BYI3 521 aaPredicted RBP6.15□□□□□ -1.42
VPS50-206ENST00000443443 MYH16Q9H6N6 1097 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 MCM8Q9UJA3 840 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 GPR45Q9Y5Y3 372 aa6.15□□□□□ -1.42
VPS50-206ENST00000443443 ATRNL1Q5VV63 1379 aa6.15□□□□□ -1.43
VPS50-206ENST00000443443 NUDT3O95989 172 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 AGAP9Q5VTM2 703 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 METRNLQ641Q3 311 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 ZNF529Q6P280 563 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 PGM2L1Q6PCE3 622 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 MAPKAPK5Q8IW41 473 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 DPF2Q92785 391 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 NEU1Q99519 415 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 SLC5A4Q9NY91 659 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 ZNHIT2Q9UHR6 403 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 RUVBL1Q9Y265 456 aaKnown RBP6.14□□□□□ -1.43
VPS50-206ENST00000443443 RIPOR2Q9Y4F9 1068 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms