RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 GANQ9H2C0 597 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 ETAA1Q9NY74 926 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 PLAGL2Q9UPG8 496 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 SOWAHDA6NJG2 315 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 OGTO15294 1046 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 DLATP10515 647 aaKnown RBP8.74□□□□□ -1.01
CCDC39-201ENST00000442201 ACTN1P12814 892 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 UCHL3P15374 230 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 MCL1Q07820 350 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 MEA1Q16626 185 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 KLHDC7AQ5VTJ3 777 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 E4F1Q66K89 784 aaPredicted RBP8.74□□□□□ -1.01
CCDC39-201ENST00000442201 TRIM65Q6PJ69 517 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 MPZL3Q6UWV2 235 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 SRGAP1Q7Z6B7 1085 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 ZBTB33Q86T24 672 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 SLAIN1Q8ND83 568 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 BAP1Q92560 729 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 RBAKQ9NYW8 714 aaPredicted RBP8.74□□□□□ -1.01
CCDC39-201ENST00000442201 DDX20Q9UHI6 824 aaKnown RBP8.74□□□□□ -1.01
CCDC39-201ENST00000442201 TNFSF13BQ9Y275 285 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 LRRC53A6NM62 1247 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 LRRIQ3A6PVS8 624 aaPredicted RBP8.73□□□□□ -1.01
CCDC39-201ENST00000442201 PMM2O15305 246 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 TREHO43280 583 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 B4GALT5O43286 388 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 CCP110O43303 1012 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 CSDE1O75534 798 aaKnown RBP8.73□□□□□ -1.01
CCDC39-201ENST00000442201 HNRNPH3P31942 346 aaKnown RBP8.73□□□□□ -1.01
CCDC39-201ENST00000442201 GTF2H1P32780 548 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 APBA1Q02410 837 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 PSMD6Q15008 389 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 KIZQ2M2Z5 673 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 ZNF568Q3ZCX4 644 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 KRT39Q6A163 491 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 PDXDC1Q6P996 788 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 EFCAB13Q8IY85 973 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 CCAR2Q8N163 923 aaKnown RBP8.73□□□□□ -1.01
CCDC39-201ENST00000442201 SPAG5Q96R06 1193 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 GCOM2Q9BZD3 368 aaPredicted RBP8.73□□□□□ -1.01
CCDC39-201ENST00000442201 INTS2Q9H0H0 1204 aaKnown RBP8.73□□□□□ -1.01
CCDC39-201ENST00000442201 KCND1Q9NSA2 647 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 TRMT1Q9NXH9 659 aaKnown RBP8.73□□□□□ -1.01
CCDC39-201ENST00000442201 FBXL5Q9UKA1 691 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 GINS2Q9Y248 185 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 ERLIN2O94905 339 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 IQCF3P0C7M6 154 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 CST5P28325 142 aaPredicted RBP8.73□□□□□ -1.01
CCDC39-201ENST00000442201 HOXC8P31273 242 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 HIC1Q14526 733 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 WDR59Q6PJI9 974 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 CRELD2Q6UXH1 353 aaPredicted RBP8.73□□□□□ -1.01
CCDC39-201ENST00000442201 RAD9BQ6WBX8 426 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 PCSK9Q8NBP7 692 aaKnown RBP8.73□□□□□ -1.01
CCDC39-201ENST00000442201 DNAJB3Q8WWF6 145 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 CHP1Q99653 195 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 TMEM117Q9H0C3 514 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 TMEM8AQ9HCN3 771 aa8.73□□□□□ -1.01
CCDC39-201ENST00000442201 CNTNAP2Q9UHC6 1331 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 KIF2AO00139 706 aaPredicted RBP8.72□□□□□ -1.01
CCDC39-201ENST00000442201 ABLIM1O14639 778 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 ZSCAN12O43309 604 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 INHAP05111 366 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 ASGR1P07306 291 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 PROZP22891 400 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 GRK4P32298 578 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 ZNF200P98182 395 aaPredicted RBP8.72□□□□□ -1.01
CCDC39-201ENST00000442201 CDK17Q00537 523 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 TMEM62Q0P6H9 643 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 MTF1Q14872 753 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 ELF2Q15723 593 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 AMHR2Q16671 573 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 FAM47CQ5HY64 1035 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 EEF1DP3Q658K8 133 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 DPY19L2P1Q6NXN4 242 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 TAF2Q6P1X5 1199 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 RUFY4Q6ZNE9 571 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 RNF180Q86T96 592 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 EHBP1Q8NDI1 1231 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 KLHDC9Q8NEP7 349 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 SYN2Q92777 582 aaPredicted RBP8.72□□□□□ -1.01
CCDC39-201ENST00000442201 POP1Q99575 1024 aaKnown RBP8.72□□□□□ -1.01
CCDC39-201ENST00000442201 ADAMTS10Q9H324 1103 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 PTPRHQ9HD43 1115 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 SIX2Q9NPC8 291 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 DAAM1Q9Y4D1 1078 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 TRIM17Q9Y577 477 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 CASP8AP2Q9UKL3 1982 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 TNNI1P19237 187 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 GRIK3Q13003 919 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 RAPGEF1Q13905 1077 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 KCNA10Q16322 511 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 ZBTB41Q5SVQ8 909 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 SFMBT2Q5VUG0 894 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 SV2AQ7L0J3 742 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 BRSK2Q8IWQ3 736 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 NME8Q8N427 588 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 CDT1Q9H211 546 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 PDE11AQ9HCR9 933 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 HMX1Q9NP08 348 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms