RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ECM1Q16610 540 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 Q4G0T1 1027 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 TMEM119Q4V9L6 283 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 DSTYKQ6XUX3 929 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 TSHZ1Q6ZSZ6 1077 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 ANKRD33Q7Z3H0 272 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 KSR1Q8IVT5 923 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 RDH13Q8NBN7 331 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 OR8K1Q8NGG5 319 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 CPLX3Q8WVH0 158 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 MYLIPQ8WY64 445 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 TSG101Q99816 390 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 MRPL9Q9BYD2 267 aaKnown RBP7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 HAUS4Q9H6D7 363 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 TLE6Q9H808 572 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 TUFT1Q9NNX1 390 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 ANKEF1Q9NU02 776 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 RMND1Q9NWS8 449 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 PCDHB13Q9Y5F0 798 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 TNFRSF8P28908 595 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 TRPC3Q13507 836 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 LIN9Q5TKA1 542 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 EMC10Q5UCC4 262 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 PPFIBP1Q86W92 1011 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 HERC6Q8IVU3 1022 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 CRYGNQ8WXF5 182 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 AK8Q96MA6 479 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 C11orf84Q9BUA3 381 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 C1orf112Q9NSG2 853 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 PRMT7Q9NVM4 692 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 KLK14Q9P0G3 267 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 ANO9A1A5B4 782 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 SLC16A4O15374 487 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 CCNE2O96020 404 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 POMCP01189 267 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 URODP06132 367 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 KRT13P13646 458 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 CCNE1P24864 410 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 CIITAP33076 1130 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 EFNA5P52803 228 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 ORC2Q13416 577 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 HYIQ5T013 277 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 ABHD15Q6UXT9 468 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 SLC24A5Q71RS6 500 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 HDXQ7Z353 690 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 TMCO2Q7Z6W1 182 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 CCDC170Q8IYT3 715 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 MMGT1Q8N4V1 131 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 ANKRD20A12PQ8NF67 263 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 SLC5A5Q92911 643 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 COLEC11Q9BWP8 271 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 APOL5Q9BWW9 433 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 CLDND1Q9NY35 253 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZNFX1Q9P2E3 1918 aaKnown RBP7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 OPLAHO14841 1288 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 N4BP3O15049 544 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 NPTXRO95502 500 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 PLEKP08567 350 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 PLCG1P19174 1290 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 SP100P23497 879 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 FXR2P51116 673 aaKnown RBP eCLIP7.97□□□□□ -1.135e-7■■■■■ 31.5
CDC42BPA-208ENST00000442054 KCNMA1Q12791 1236 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 CES5AQ6NT32 575 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 LRRC31Q6UY01 552 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 LARP4BQ92615 738 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 MRPL4Q9BYD3 311 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 RWDD3Q9Y3V2 267 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 ASTN1O14525 1302 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 GRIN2DO15399 1336 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 RBM47A0AV96 593 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 ADCY6O43306 1168 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 TRAPPC3O43617 180 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 SRGAP2O75044 1071 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 BAIAP3O94812 1187 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 TNNI1P19237 187 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 MARSP56192 900 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZBED6P86452 979 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 UBXN1Q04323 297 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 CLUL1Q15846 466 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 TMEM240Q5SV17 173 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 C4orf19Q8IY42 314 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 TXLNBQ8N3L3 684 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 GOLGA5Q8TBA6 731 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 P2RX5Q93086 422 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 DNAJC19Q96DA6 116 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 C16orf70Q9BSU1 422 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 NHEJ1Q9H9Q4 299 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 RPF1Q9H9Y2 349 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 PARVGQ9HBI0 331 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 CALCOCO1Q9P1Z2 691 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 TMEM191BP0C7N4 346 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 KLRC2P26717 231 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 RAB27AP51159 221 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 LAMTOR4Q0VGL1 99 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 MCM6Q14566 821 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 CCNI2Q6ZMN8 369 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 SERINC5Q86VE9 423 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 NELFCDQ8IXH7 590 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 TUBGCP2Q9BSJ2 902 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms