RNA–Protein interactions for RNA: ENST00000441012.6

NR1H3-211, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-211ENST00000441012 DNAAF5Q86Y56 855 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 PALB2Q86YC2 1186 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 SEMA4DQ92854 862 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 RNPC3Q96LT9 517 aaKnown RBP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 NIFKQ9BYG3 293 aaKnown RBP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 CTTNBP2NLQ9P2B4 639 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 COG5Q9UP83 839 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 COL11A1P12107 1806 aaPredicted RBP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 FAM153BP0C7A2 387 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 GJA5P36382 358 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 NAMPTP43490 491 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 INHBEP58166 350 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 BPIFB4P59827 614 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 RNASE9P60153 205 aaKnown RBP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 MRPS25P82663 173 aaKnown RBP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 FMO1Q01740 532 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 FAM153CQ494X1 144 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 SV2AQ7L0J3 742 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 CCDC60Q8IWA6 550 aaPredicted RBP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 PPM1KQ8N3J5 372 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 ZSWIM2Q8NEG5 633 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 RIN2Q8WYP3 895 aaPredicted RBP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 PIK3R5Q8WYR1 880 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 PCDHB18PQ96TA0 734 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 FAM129AQ9BZQ8 928 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 DHX33Q9H6R0 707 aaKnown RBP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 SEPT11Q9NVA2 429 aaKnown RBP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 FAM153AQ9UHL3 310 aa16.3■□□□□ 0.2
NR1H3-211ENST00000441012 UTP11Q9Y3A2 253 aaKnown RBP16.3■□□□□ 0.2
NR1H3-211ENST00000441012 WDR81Q562E7 1941 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 GOLGA8IPA6NC78 632 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 ZSCAN5CA6NGD5 496 aaPredicted RBP16.29■□□□□ 0.2
NR1H3-211ENST00000441012 GOLGA8JA6NMD2 632 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 LDHAP00338 332 aaKnown RBP16.29■□□□□ 0.2
NR1H3-211ENST00000441012 FGGP02679 453 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 CYP11B1P15538 503 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 RFC5P40937 340 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 PDE6CP51160 858 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 DCAF12L1Q5VU92 463 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 ACAD10Q6JQN1 1059 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 PPP1R2P3Q6NXS1 205 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 FBXO46Q6PJ61 603 aaPredicted RBP16.29■□□□□ 0.2
NR1H3-211ENST00000441012 ANKRD13AQ8IZ07 590 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 DDX1Q92499 740 aaKnown RBP16.29■□□□□ 0.2
NR1H3-211ENST00000441012 CD101Q93033 1021 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 SAAL1Q96ER3 474 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 TRIM11Q96F44 468 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 ZSWIM1Q9BR11 485 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 AP1M1Q9BXS5 423 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 POLR3FQ9H1D9 316 aaPredicted RBP16.29■□□□□ 0.2
NR1H3-211ENST00000441012 PORCNQ9H237 461 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 AVENQ9NQS1 362 aaPredicted RBP16.29■□□□□ 0.2
NR1H3-211ENST00000441012 ADGRA3Q8IWK6 1321 aa16.29■□□□□ 0.2
NR1H3-211ENST00000441012 SRRM3A6NNA2 597 aaPredicted RBP16.28■□□□□ 0.2
NR1H3-211ENST00000441012 HMGB1P1B2RPK0 211 aaPredicted RBP16.28■□□□□ 0.2
NR1H3-211ENST00000441012 HNRNPDLO14979 420 aaKnown RBP16.28■□□□□ 0.2
NR1H3-211ENST00000441012 CYP26A1O43174 497 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 OATP04181 439 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 MYBL1P10243 752 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 EDNRBP24530 442 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 ARL2P36404 184 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 PEX5P50542 639 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 LBX2Q6XYB7 198 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 TAS1R3Q7RTX0 852 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 RIOX2Q8IUF8 465 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 TAS1R2Q8TE23 839 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 PSPC1Q8WXF1 523 aaKnown RBP16.28■□□□□ 0.2
NR1H3-211ENST00000441012 KAT5Q92993 513 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 SH2D3AQ9BRG2 576 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 DDX47Q9H0S4 455 aaKnown RBP16.28■□□□□ 0.2
NR1H3-211ENST00000441012 TMEM134Q9H6X4 195 aa16.28■□□□□ 0.2
NR1H3-211ENST00000441012 SEPT9Q9UHD8 586 aaPredicted RBP16.28■□□□□ 0.2
NR1H3-211ENST00000441012 ESYT3A0FGR9 886 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 SLC34A2O95436 690 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 TGFB3P10600 412 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 ITGA4P13612 1032 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 CHRNA3P32297 505 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 EMC2Q15006 297 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 CYP1B1Q16678 543 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 ZACNQ401N2 412 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 LRRC31Q6UY01 552 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 CCDC127Q96BQ5 260 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 HINFPQ9BQA5 517 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 ELP3Q9H9T3 547 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 ZNF302Q9NR11 478 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 PCYOX1Q9UHG3 505 aa16.27■□□□□ 0.2
NR1H3-211ENST00000441012 KIAA1217Q5T5P2 1943 aa16.27■□□□□ 0.19
NR1H3-211ENST00000441012 PPFIA4O75335 1185 aa16.27■□□□□ 0.19
NR1H3-211ENST00000441012 CTNNA1P35221 906 aaKnown RBP16.27■□□□□ 0.19
NR1H3-211ENST00000441012 STRN3Q13033 797 aa16.27■□□□□ 0.19
NR1H3-211ENST00000441012 HLTFQ14527 1009 aaKnown RBP eCLIP16.27■□□□□ 0.19
NR1H3-211ENST00000441012 CLEC16AQ2KHT3 1053 aa16.27■□□□□ 0.19
NR1H3-211ENST00000441012 TTMPQ5BVD1 217 aa16.27■□□□□ 0.19
NR1H3-211ENST00000441012 DUPD1Q68J44 220 aa16.27■□□□□ 0.19
NR1H3-211ENST00000441012 KDM7AQ6ZMT4 941 aa16.27■□□□□ 0.19
NR1H3-211ENST00000441012 SLC47A2Q86VL8 602 aa16.27■□□□□ 0.19
NR1H3-211ENST00000441012 ALG3Q92685 438 aa16.27■□□□□ 0.19
NR1H3-211ENST00000441012 CEP89Q96ST8 783 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms