RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 EDN1P05305 212 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 HNRNPA1P09651 372 aaKnown RBP eCLIP12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 LAMP2P13473 410 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 NPR3P17342 541 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 PTGDRQ13258 359 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 PSMD5Q16401 504 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 ECM1Q16610 540 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 NT5DC1Q5TFE4 455 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 ATF7IP2Q5U623 682 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 SIX5Q8N196 739 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 SLC44A3Q8N4M1 653 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 IGSF22Q8N9C0 903 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 LNX1Q8TBB1 728 aaPredicted RBP12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 SNX29Q8TEQ0 813 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 RSAD2Q8WXG1 361 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 RTP3Q9BQQ7 232 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 POLD4Q9HCU8 107 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 DDX19AQ9NUU7 478 aaKnown RBP12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 WNT16Q9UBV4 365 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 FBXW11Q9UKB1 542 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 DNM3Q9UQ16 869 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 ZFP37Q9Y6Q3 630 aaPredicted RBP12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 PLXNA3P51805 1871 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 TMEM189-UBE2V1I3L0A0 370 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 LAD1O00515 517 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 PI15O43692 258 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 NARSO43776 548 aaKnown RBP12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 SRFP11831 508 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 NBR1Q14596 966 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 LIN9Q5TKA1 542 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 KRT79Q5XKE5 535 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 CWF19L1Q69YN2 538 aaKnown RBP12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 DCLRE1AQ6PJP8 1040 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 PPP1R10Q96QC0 940 aaKnown RBP12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 KIFC3Q9BVG8 833 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 CXCL16Q9H2A7 254 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 TNFSF13BQ9Y275 285 aa12.79□□□□□ -0.36
UBE2D4-204ENST00000440899 CCDC169A6NNP5 214 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 STK25O00506 426 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 TRAPPC3O43617 180 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 XYLBO75191 536 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 B3GAT3O94766 335 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 CFHP08603 1231 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 FGFR3P22607 806 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 FSHRP23945 695 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 HOXA9P31269 272 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 PRPHP41219 470 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 NBL1P41271 181 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 NPTX2P47972 431 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 TOB1P50616 345 aaPredicted RBP12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 RAB33AQ14088 237 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 UVSSAQ2YD98 709 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 PPM1LQ5SGD2 360 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 GET4Q7L5D6 327 aaPredicted RBP12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 UROC1Q96N76 676 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 KIF2CQ99661 725 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 ACO2Q99798 780 aaKnown RBP12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 TMEM134Q9H6X4 195 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 TOPORSQ9NS56 1045 aaPredicted RBP12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 KIF3AQ9Y496 699 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 RBM19Q9Y4C8 960 aaKnown RBP12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 PCDHB6Q9Y5E3 794 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 PHLPP2Q6ZVD8 1323 aa12.78□□□□□ -0.36
UBE2D4-204ENST00000440899 KRBA1A5PL33 1030 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 ANHXE9PGG2 379 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 E9PMD0 336 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 ADAM12O43184 909 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 C8AP07357 584 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 RFX1P22670 979 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 OR1D2P34982 312 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 GRM5P41594 1212 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 YARSP54577 528 aaKnown RBP12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 PEX3P56589 373 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 HTR4Q13639 388 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 GLRA4Q5JXX5 417 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 AXDND1Q5T1B0 1012 aaPredicted RBP12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 DTHD1Q6ZMT9 781 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 RTL10Q7L3V2 364 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 GRASPQ7Z6J2 395 aaPredicted RBP12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 CCDC105Q8IYK2 499 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 DAW1Q8N136 415 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 DTWD2Q8NBA8 298 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 DRC1Q96MC2 740 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 CCDC94Q9BW85 323 aaPredicted RBP12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 C17orf75Q9HAS0 396 aa12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 MTCL1Q9Y4B5 1905 aaKnown RBP12.77□□□□□ -0.37
UBE2D4-204ENST00000440899 SMIM28A0A1B0GU29 152 aa12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 CCL16O15467 120 aa12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 HIP1RO75146 1068 aa12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 POU2F2P09086 479 aa12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 CLCNKBP51801 687 aa12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 DMP1Q13316 513 aaPredicted RBP12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 UPP1Q16831 310 aa12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 ZNF568Q3ZCX4 644 aa12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 XKR4Q5GH76 650 aa12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 PHLDB3Q6NSJ2 640 aa12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 RINT1Q6NUQ1 792 aa12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 ALKAL1Q6UXT8 129 aa12.76□□□□□ -0.37
UBE2D4-204ENST00000440899 ANKS3Q6ZW76 656 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms