RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 SGSM3Q96HU1 749 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 PTCHD1Q96NR3 888 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.99□□□□□ -1.299e-25■■□□□ 14.5
CHD6-204ENST00000440647 MCMBPQ9BTE3 642 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 BRINP2Q9C0B6 783 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 KANSL2Q9H9L4 492 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 CD320Q9NPF0 282 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 XPNPEP3Q9NQH7 507 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 MTMR10Q9NXD2 777 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 KLHL42Q9P2K6 505 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 IMPACTQ9P2X3 320 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 CGGBP1Q9UFW8 167 aaPredicted RBP6.99□□□□□ -1.29
CHD6-204ENST00000440647 RCAN3Q9UKA8 241 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 SMG5Q9UPR3 1016 aaKnown RBP6.99□□□□□ -1.29
CHD6-204ENST00000440647 STXBP5LQ9Y2K9 1186 aa6.99□□□□□ -1.29
CHD6-204ENST00000440647 GREB1LQ9C091 1923 aaPredicted RBP6.99□□□□□ -1.29
CHD6-204ENST00000440647 A0A1W2PQ27 194 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 A0A1W2PQ64 194 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 A0A1W2PQC6 194 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 A0A1W2PQD8 194 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 ABLIM1O14639 778 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 AURKAO14965 403 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 MPOP05164 745 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 PGK2P07205 417 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 IBSPP21815 317 aaPredicted RBP6.98□□□□□ -1.29
CHD6-204ENST00000440647 ETFBP38117 255 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 STAT3P40763 770 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 ADCYAP1R1P41586 468 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 TDO2P48775 406 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 YBX1P67809 324 aaKnown RBP6.98□□□□□ -1.29
CHD6-204ENST00000440647 DLG4P78352 724 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 AMPD2Q01433 879 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 MVKQ03426 396 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 ARID5AQ03989 594 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 GRB10Q13322 594 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 LRRC41Q15345 812 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 TRIM60Q495X7 471 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 FAM47AQ5JRC9 791 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 PRAMEF19Q5SWL8 479 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 EEF1DP3Q658K8 133 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 RCSD1Q6JBY9 416 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 CTR9Q6PD62 1173 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 RNF180Q86T96 592 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 RIOX2Q8IUF8 465 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 FERMT2Q96AC1 680 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 DDX11Q96FC9 970 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 SLF1Q9BQI6 1058 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 LNPKQ9C0E8 428 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 PUS7LQ9H0K6 701 aaKnown RBP6.98□□□□□ -1.29
CHD6-204ENST00000440647 ZNF287Q9HBT7 754 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 ECHDC1Q9NTX5 307 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 FBXO28Q9NVF7 368 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 ACTR10Q9NZ32 417 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 PRKAG3Q9UGI9 489 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 NRBP1Q9UHY1 535 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 ISY1Q9ULR0 285 aaKnown RBP6.98□□□□□ -1.29
CHD6-204ENST00000440647 AKT3Q9Y243 479 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 CNPY2Q9Y2B0 182 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 SZT2Q5T011 3432 aa6.98□□□□□ -1.29
CHD6-204ENST00000440647 CCDC194A0A1B0GVG4 234 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 VWA5AO00534 786 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 PEX14O75381 377 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 CHGBP05060 677 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 APPP05067 770 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 FGRP09769 529 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 NAT2P11245 290 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 AKR1A1P14550 325 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 GNAT2P19087 354 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 SDHBP21912 280 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 SRSF3P84103 164 aaKnown RBP6.97□□□□□ -1.29
CHD6-204ENST00000440647 DPY19L1Q2PZI1 675 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 SNRNP48Q6IEG0 339 aaKnown RBP6.97□□□□□ -1.29
CHD6-204ENST00000440647 NME8Q8N427 588 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 SLC43A3Q8NBI5 491 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 APPBP2Q92624 585 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 BADQ92934 168 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 TEX13BQ9BXU2 312 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 GCM1Q9NP62 436 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 KLHL14Q9P2G3 628 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 APEX2Q9UBZ4 518 aa6.97□□□□□ -1.29
CHD6-204ENST00000440647 ROBO3Q96MS0 1386 aa6.96□□□□□ -1.29
CHD6-204ENST00000440647 C2orf71A6NGG8 1288 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 SMIM22K7EJ46 135 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 RNF113AO15541 343 aaKnown RBP6.96□□□□□ -1.3
CHD6-204ENST00000440647 GPAA1O43292 621 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 NUAK1O60285 661 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 PQBP1O60828 265 aaKnown RBP6.96□□□□□ -1.3
CHD6-204ENST00000440647 ZBED4O75132 1171 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 PARNO95453 639 aaKnown RBP6.96□□□□□ -1.3
CHD6-204ENST00000440647 PGK1P00558 417 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 ZFYP08048 801 aaPredicted RBP6.96□□□□□ -1.3
CHD6-204ENST00000440647 SLC3A2P08195 630 aaKnown RBP6.96□□□□□ -1.3
CHD6-204ENST00000440647 CLTBP09497 229 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 LONRF3Q496Y0 759 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 SBK1Q52WX2 424 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 FAM109BQ6ICB4 259 aaPredicted RBP6.96□□□□□ -1.3
CHD6-204ENST00000440647 SDE2Q6IQ49 451 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 TTLL10Q6ZVT0 673 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 ZNF444Q8N0Y2 327 aaPredicted RBP6.96□□□□□ -1.3
CHD6-204ENST00000440647 CPXCR1Q8N123 301 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms