RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ZPBP2Q6X784 338 aa15.04■□□□□ -0
LTBR-202ENST00000440421 GJD3Q8N144 294 aa15.04■□□□□ -0
LTBR-202ENST00000440421 DDX12PQ92771 950 aa15.04■□□□□ -0
LTBR-202ENST00000440421 ACAP3Q96P50 834 aa15.04■□□□□ -0
LTBR-202ENST00000440421 KLHL5Q96PQ7 755 aa15.04■□□□□ -0
LTBR-202ENST00000440421 EMILIN2Q9BXX0 1053 aa15.04■□□□□ -0
LTBR-202ENST00000440421 TOPORSQ9NS56 1045 aaPredicted RBP15.04■□□□□ -0
LTBR-202ENST00000440421 TBX20Q9UMR3 447 aa15.04■□□□□ -0
LTBR-202ENST00000440421 SMIM28A0A1B0GU29 152 aa15.03■□□□□ -0
LTBR-202ENST00000440421 HNRNPDLO14979 420 aaKnown RBP15.03■□□□□ -0
LTBR-202ENST00000440421 CLDN3O15551 220 aa15.03■□□□□ -0
LTBR-202ENST00000440421 CUTAO60888 179 aa15.03■□□□□ -0
LTBR-202ENST00000440421 LILRB3O75022 631 aa15.03■□□□□ -0
LTBR-202ENST00000440421 KIF4AO95239 1232 aa15.03■□□□□ -0
LTBR-202ENST00000440421 BRD1O95696 1058 aa15.03■□□□□ -0
LTBR-202ENST00000440421 EFEMP2O95967 443 aa15.03■□□□□ -0
LTBR-202ENST00000440421 KLRC2P26717 231 aa15.03■□□□□ -0
LTBR-202ENST00000440421 DNM1Q05193 864 aaKnown RBP15.03■□□□□ -0
LTBR-202ENST00000440421 ZP2Q05996 745 aa15.03■□□□□ -0
LTBR-202ENST00000440421 ZC2HC1CQ53FD0 456 aaPredicted RBP15.03■□□□□ -0
LTBR-202ENST00000440421 SFR1Q86XK3 245 aa15.03■□□□□ -0
LTBR-202ENST00000440421 RNF168Q8IYW5 571 aaPredicted RBP15.03■□□□□ -0
LTBR-202ENST00000440421 SLC22A17Q8WUG5 538 aa15.03■□□□□ -0
LTBR-202ENST00000440421 SNX27Q96L92 541 aa15.03■□□□□ -0
LTBR-202ENST00000440421 PPP1R10Q96QC0 940 aaKnown RBP15.03■□□□□ -0
LTBR-202ENST00000440421 FIZ1Q96SL8 496 aa15.03■□□□□ -0
LTBR-202ENST00000440421 HAPLN2Q9GZV7 340 aa15.03■□□□□ -0
LTBR-202ENST00000440421 GOLGA2P5Q9HBQ8 144 aa15.03■□□□□ -0
LTBR-202ENST00000440421 TRIP11Q15643 1979 aa15.02■□□□□ -0
LTBR-202ENST00000440421 SF3B1O75533 1304 aaKnown RBP eCLIP15.02■□□□□ -0
LTBR-202ENST00000440421 ME1P48163 572 aa15.02■□□□□ -0
LTBR-202ENST00000440421 DSG1Q02413 1049 aa15.02■□□□□ -0
LTBR-202ENST00000440421 MCL1Q07820 350 aa15.02■□□□□ -0
LTBR-202ENST00000440421 USP41Q3LFD5 358 aa15.02■□□□□ -0
LTBR-202ENST00000440421 KIAA0319Q5VV43 1072 aa15.02■□□□□ -0
LTBR-202ENST00000440421 KANK3Q6NY19 840 aa15.02■□□□□ -0
LTBR-202ENST00000440421 SHC4Q6S5L8 630 aa15.02■□□□□ -0
LTBR-202ENST00000440421 ALKAL1Q6UXT8 129 aa15.02■□□□□ -0
LTBR-202ENST00000440421 ADHFE1Q8IWW8 467 aa15.02■□□□□ -0
LTBR-202ENST00000440421 C12orf76Q8N812 135 aaPredicted RBP15.02■□□□□ -0
LTBR-202ENST00000440421 RIN2Q8WYP3 895 aaPredicted RBP15.02■□□□□ -0
LTBR-202ENST00000440421 STAMQ92783 540 aa15.02■□□□□ -0
LTBR-202ENST00000440421 KHSRPQ92945 711 aaKnown RBP eCLIP15.02■□□□□ -0
LTBR-202ENST00000440421 ZMAT2Q96NC0 199 aaKnown RBP15.02■□□□□ -0
LTBR-202ENST00000440421 S1PR5Q9H228 398 aa15.02■□□□□ -0
LTBR-202ENST00000440421 TBC1D7Q9P0N9 293 aa15.02■□□□□ -0
LTBR-202ENST00000440421 PRKAG3Q9UGI9 489 aa15.02■□□□□ -0
LTBR-202ENST00000440421 CDH22Q9UJ99 828 aa15.02■□□□□ -0
LTBR-202ENST00000440421 SSX2IPQ9Y2D8 614 aa15.02■□□□□ -0
LTBR-202ENST00000440421 SPDYE4A6NLX3 237 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 MEFVO15553 781 aaPredicted RBP15.01□□□□□ -0.01
LTBR-202ENST00000440421 MYBP10242 640 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 IDEP14735 1019 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 HOXB8P17481 243 aaPredicted RBP15.01□□□□□ -0.01
LTBR-202ENST00000440421 IGFBP6P24592 240 aaPredicted RBP15.01□□□□□ -0.01
LTBR-202ENST00000440421 CLCNKBP51801 687 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 GTF2BQ00403 316 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 SOX4Q06945 474 aaPredicted RBP15.01□□□□□ -0.01
LTBR-202ENST00000440421 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 XKR4Q5GH76 650 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 RARS2Q5T160 578 aaKnown RBP15.01□□□□□ -0.01
LTBR-202ENST00000440421 FAM171A1Q5VUB5 890 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 PPFIBP1Q86W92 1011 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 CEP57Q86XR8 500 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 GLYCTKQ8IVS8 523 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 KCNG4Q8TDN1 519 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 KCNN1Q92952 543 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 DHX58Q96C10 678 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 DNAJC19Q96DA6 116 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 CHST7Q9NS84 486 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 CFAP45Q9UL16 551 aa15.01□□□□□ -0.01
LTBR-202ENST00000440421 SPTBN5Q9NRC6 3674 aaKnown RBP15.01□□□□□ -0.01
LTBR-202ENST00000440421 TEX28O15482 410 aa15□□□□□ -0.01
LTBR-202ENST00000440421 B3GAT3O94766 335 aa15□□□□□ -0.01
LTBR-202ENST00000440421 PIGRP01833 764 aa15□□□□□ -0.01
LTBR-202ENST00000440421 ADH1AP07327 375 aa15□□□□□ -0.01
LTBR-202ENST00000440421 WEE2P0C1S8 567 aa15□□□□□ -0.01
LTBR-202ENST00000440421 CXCL8P10145 99 aa15□□□□□ -0.01
LTBR-202ENST00000440421 KCNE1P15382 129 aa15□□□□□ -0.01
LTBR-202ENST00000440421 GAP43P17677 238 aa15□□□□□ -0.01
LTBR-202ENST00000440421 SCP2P22307 547 aa15□□□□□ -0.01
LTBR-202ENST00000440421 TNFSF9P41273 254 aa15□□□□□ -0.01
LTBR-202ENST00000440421 CLCN4P51793 760 aa15□□□□□ -0.01
LTBR-202ENST00000440421 SPAG1Q07617 926 aa15□□□□□ -0.01
LTBR-202ENST00000440421 SLC10A6Q3KNW5 377 aa15□□□□□ -0.01
LTBR-202ENST00000440421 RTP2Q5QGT7 225 aa15□□□□□ -0.01
LTBR-202ENST00000440421 ZBTB41Q5SVQ8 909 aa15□□□□□ -0.01
LTBR-202ENST00000440421 AXDND1Q5T1B0 1012 aaPredicted RBP15□□□□□ -0.01
LTBR-202ENST00000440421 PRSS55Q6UWB4 352 aaPredicted RBP15□□□□□ -0.01
LTBR-202ENST00000440421 MAP4K3Q8IVH8 894 aa15□□□□□ -0.01
LTBR-202ENST00000440421 SUSD6Q92537 303 aa15□□□□□ -0.01
LTBR-202ENST00000440421 C18orf25Q96B23 403 aaPredicted RBP15□□□□□ -0.01
LTBR-202ENST00000440421 CHAMP1Q96JM3 812 aa15□□□□□ -0.01
LTBR-202ENST00000440421 FBXL18Q96ME1 805 aa15□□□□□ -0.01
LTBR-202ENST00000440421 POP1Q99575 1024 aaKnown RBP15□□□□□ -0.01
LTBR-202ENST00000440421 IKZF4Q9H2S9 585 aa15□□□□□ -0.01
LTBR-202ENST00000440421 MRPL44Q9H9J2 332 aaKnown RBP15□□□□□ -0.01
LTBR-202ENST00000440421 SLC38A7Q9NVC3 462 aa15□□□□□ -0.01
LTBR-202ENST00000440421 CNTN3Q9P232 1028 aa15□□□□□ -0.01
LTBR-202ENST00000440421 PCDHA7Q9UN72 937 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms