RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 PLXNA3P51805 1871 aa17.88■□□□□ 0.45
SNRPD3-204ENST00000439775 CCDC195A0A1B0GUA6 201 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 TMEM189-UBE2V1I3L0A0 370 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 TGM5O43548 720 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 BRD1O95696 1058 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 PROZP22891 400 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 SLC12A3P55017 1021 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 ZRSR1Q15695 479 aaKnown RBP17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 TMEM119Q4V9L6 283 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 LARP1BQ659C4 914 aaKnown RBP17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 LILRA6Q6PI73 481 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 BRAPQ7Z569 592 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 HASPINQ8TF76 798 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 PIK3R5Q8WYR1 880 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 CDK5RAP3Q96JB5 506 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 UROC1Q96N76 676 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 CCDC94Q9BW85 323 aaPredicted RBP17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 TOPORSQ9NS56 1045 aaPredicted RBP17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 ZDHHC7Q9NXF8 308 aa17.87■□□□□ 0.45
SNRPD3-204ENST00000439775 BMP15O95972 392 aa17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 MCF2P10911 925 aa17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 PLS3P13797 630 aa17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 YARSP54577 528 aaKnown RBP17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 XKR4Q5GH76 650 aa17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 FAM171A1Q5VUB5 890 aa17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 PDXDC1Q6P996 788 aa17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 PRSS55Q6UWB4 352 aaPredicted RBP17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 CEP120Q8N960 986 aa17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 WDR6Q9NNW5 1121 aaKnown RBP17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 LIMD1Q9UGP4 676 aa17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 C2orf16Q68DN1 1984 aa17.86■□□□□ 0.45
SNRPD3-204ENST00000439775 ABLIM1O14639 778 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 SLC16A4O15374 487 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 CLUHO75153 1309 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 RFPL2O75678 378 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 ASGR2P07307 311 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 PLA2G4BP0C869 781 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 RPL17P18621 184 aaKnown RBP17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 CUL4AQ13619 759 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 GLRA4Q5JXX5 417 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 MPZL3Q6UWV2 235 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 ALKAL1Q6UXT8 129 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 PALB2Q86YC2 1186 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 TMEM161BQ8NDZ6 487 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 LNX1Q8TBB1 728 aaPredicted RBP17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 STAMQ92783 540 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 KCNN1Q92952 543 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 ZNF707Q96C28 371 aaPredicted RBP17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 PRRX2Q99811 253 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 TARS2Q9BW92 718 aaKnown RBP17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 FBXW11Q9UKB1 542 aa17.85■□□□□ 0.45
SNRPD3-204ENST00000439775 SMIM28A0A1B0GU29 152 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 SFI1A8K8P3 1242 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 SMTNP53814 917 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 STRN3Q13033 797 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 PSMD5Q16401 504 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 UPP1Q16831 310 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 DCLRE1AQ6PJP8 1040 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 GLYCTKQ8IVS8 523 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 SMG7Q92540 1137 aaKnown RBP17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 SNX27Q96L92 541 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 PLIN2Q99541 437 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 CLSTN3Q9BQT9 956 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 SLC38A7Q9NVC3 462 aa17.84■□□□□ 0.45
SNRPD3-204ENST00000439775 H0YCG3 227 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 TOM1L1O75674 476 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 ZMYND10O75800 440 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 B3GAT3O94766 335 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 SPATA31D3P0C874 917 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 MAPTP10636 758 aaKnown RBP17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 FGFR3P22607 806 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 LONP1P36776 959 aaKnown RBP17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 CLCNKBP51801 687 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 NHLH1Q02575 133 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 RAD51AP2Q09MP3 1159 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 SPATA31D4Q6ZUB0 917 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 CEP57Q86XR8 500 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 CALML4Q96GE6 196 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 PRKD2Q9BZL6 878 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 CNTN3Q9P232 1028 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 LARSQ9P2J5 1176 aaKnown RBP17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 ODF2LQ9ULJ1 636 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 KMT2EQ8IZD2 1858 aa17.83■□□□□ 0.44
SNRPD3-204ENST00000439775 TRAPPC3O43617 180 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 N4BP1O75113 896 aaKnown RBP17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 MYBP10242 640 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 KCNE1P15382 129 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 PDCP20941 246 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 SCP2P22307 547 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 UBA7P41226 1012 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 OSTNP61366 133 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 NOLC1Q14978 699 aaKnown RBP eCLIP17.82■□□□□ 0.447e-11■■□□□ 13.4
SNRPD3-204ENST00000439775 ARSHQ5FYA8 562 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 CD300LGQ6UXG3 332 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 ZPBP2Q6X784 338 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 DDX27Q96GQ7 796 aaKnown RBP17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 ACAP3Q96P50 834 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 TCHPQ9BT92 498 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms