RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 FKBP15Q5T1M5 1219 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 SPECC1LQ69YQ0 1117 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 NOTUMQ6P988 496 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 BRSK2Q8IWQ3 736 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 PARD3BQ8TEW8 1205 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 ELMO3Q96BJ8 720 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 APOL6Q9BWW8 343 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 CXCL16Q9H2A7 254 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 L2HGDHQ9H9P8 463 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.85□□□□□ -0.673e-8■■■■■ 42.4
CBX5-202ENST00000439541 TRMT1Q9NXH9 659 aaKnown RBP10.85□□□□□ -0.67
CBX5-202ENST00000439541 PRDM4Q9UKN5 801 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 ATP11BQ9Y2G3 1177 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 SIK3Q9Y2K2 1263 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 KIAA0100Q14667 2235 aaKnown RBP10.85□□□□□ -0.67
CBX5-202ENST00000439541 MAPK13O15264 365 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 MGEA5O60502 916 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 STAG3L1P0CL83 205 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 FMO5P49326 533 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 KCNMA1Q12791 1236 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 PAK2Q13177 524 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 PSMD6Q15008 389 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 FAM26DQ5JW98 314 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 SCARA3Q6AZY7 606 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 TWF2Q6IBS0 349 aaKnown RBP10.84□□□□□ -0.67
CBX5-202ENST00000439541 SLC27A1Q6PCB7 646 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 LRRC8DQ7L1W4 858 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 GPIHBP1Q8IV16 184 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 PPP1R13BQ96KQ4 1090 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 PCMTD1Q96MG8 357 aaPredicted RBP10.84□□□□□ -0.67
CBX5-202ENST00000439541 ADPGKQ9BRR6 497 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 PPP1R12CQ9BZL4 782 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 TMX1Q9H3N1 280 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 C11orf49Q9H6J7 331 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 ERVK-5Q9HDB9 667 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 FAM207AQ9NSI2 230 aaPredicted RBP10.84□□□□□ -0.67
CBX5-202ENST00000439541 RNF19AQ9NV58 838 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 PADI3Q9ULW8 664 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 TANC1Q9C0D5 1861 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 GOLGA6L9A6NEM1 432 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 RNF225M0QZC1 329 aaPredicted RBP10.84□□□□□ -0.67
CBX5-202ENST00000439541 KIAA0391O15091 583 aaKnown RBP10.84□□□□□ -0.67
CBX5-202ENST00000439541 ZSCAN12O43309 604 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 LDHAP00338 332 aaKnown RBP10.84□□□□□ -0.67
CBX5-202ENST00000439541 GYPCP04921 128 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 ACTN1P12814 892 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 EN2P19622 333 aaPredicted RBP10.84□□□□□ -0.67
CBX5-202ENST00000439541 GABPB1Q06547 395 aaPredicted RBP10.84□□□□□ -0.67
CBX5-202ENST00000439541 FAAP100Q0VG06 881 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 E4F1Q66K89 784 aaPredicted RBP10.84□□□□□ -0.67
CBX5-202ENST00000439541 ANKRD33Q7Z3H0 272 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 EFCAB13Q8IY85 973 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 OR5B17Q8NGF7 314 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 CPLX3Q8WVH0 158 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 SCLYQ96I15 445 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 ERGIC2Q96RQ1 377 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 LSM14BQ9BX40 385 aaKnown RBP10.84□□□□□ -0.67
CBX5-202ENST00000439541 TMEM117Q9H0C3 514 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 KIAA1586Q9HCI6 787 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 SNTG2Q9NY99 539 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 GCNT4Q9P109 453 aa10.84□□□□□ -0.67
CBX5-202ENST00000439541 MROH7Q68CQ1 1323 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 ITIH6Q6UXX5 1313 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 A0A1W2PQC6 194 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 MEIS3P2A8K0S8 358 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 CAND2O75155 1236 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 RPLP2P05387 115 aaKnown RBP10.83□□□□□ -0.68
CBX5-202ENST00000439541 NFICP08651 508 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 SELPP16109 830 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 TNNI1P19237 187 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 SLC9A1P19634 815 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 AKAP5P24588 427 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 MXI1P50539 228 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 FXR1P51114 621 aaKnown RBP eCLIP10.83□□□□□ -0.68
CBX5-202ENST00000439541 RBL2Q08999 1139 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 PCBP1Q15365 356 aaKnown RBP eCLIP10.83□□□□□ -0.682e-11■■■■■ 43.6
CBX5-202ENST00000439541 DCAF4L1Q3SXM0 396 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 ANKLE1Q8NAG6 615 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 CAGE1Q8TC20 777 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 ZNF516Q92618 1163 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 FNBP1Q96RU3 617 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 CGRRF1Q99675 332 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 TRIM6Q9C030 488 aaPredicted RBP10.83□□□□□ -0.68
CBX5-202ENST00000439541 MTMR12Q9C0I1 747 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 WNT8AQ9H1J5 351 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 RNF39Q9H2S5 420 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 AJAP1Q9UKB5 411 aaPredicted RBP10.83□□□□□ -0.68
CBX5-202ENST00000439541 ANK1P16157 1881 aa10.83□□□□□ -0.68
CBX5-202ENST00000439541 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
CBX5-202ENST00000439541 TLR3O15455 904 aaKnown RBP10.82□□□□□ -0.68
CBX5-202ENST00000439541 NBNO60934 754 aa10.82□□□□□ -0.68
CBX5-202ENST00000439541 RECQL4O94761 1208 aa10.82□□□□□ -0.68
CBX5-202ENST00000439541 AXLP30530 894 aa10.82□□□□□ -0.68
CBX5-202ENST00000439541 CYP2C18P33260 490 aa10.82□□□□□ -0.68
CBX5-202ENST00000439541 GRM5P41594 1212 aa10.82□□□□□ -0.68
CBX5-202ENST00000439541 CCL23P55773 120 aa10.82□□□□□ -0.68
CBX5-202ENST00000439541 FAM193AP78312 1265 aa10.82□□□□□ -0.68
CBX5-202ENST00000439541 PPP2R3AQ06190 1150 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms