RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 TLDC2A0PJX2 215 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 CYP26A1O43174 497 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 RARAP10276 462 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 SCTRP47872 440 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 BACE1P56817 501 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 IFI35P80217 286 aaPredicted RBP17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 HAUS6Q7Z4H7 955 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 SLC47A2Q86VL8 602 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 CPNE8Q86YQ8 564 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 AS3MTQ9HBK9 375 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 PKD2L1Q9P0L9 805 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 UVRAGQ9P2Y5 699 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 ZNFX1Q9P2E3 1918 aaKnown RBP17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 ASAP2O43150 1006 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 SPOPO43791 374 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 FGFR4P22455 802 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 MFAP3P55082 362 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 NCKAP1LP55160 1127 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 CCDC105Q8IYK2 499 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 CCDC197Q8NCU1 140 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 IL31RAQ8NI17 732 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 EPS8L3Q8TE67 593 aaKnown RBP17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 ZNF653Q96CK0 615 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 TIPINQ9BVW5 301 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 STMN4Q9H169 189 aaPredicted RBP17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 COL20A1Q9P218 1284 aa17.57■□□□□ 0.4
CLCNKA-203ENST00000439316 SCN4AP35499 1836 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 ZNF536O15090 1300 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 SMIM23A6NLE4 172 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 QARSP47897 775 aaKnown RBP17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 ZNF568Q3ZCX4 644 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 MFSD5Q6N075 450 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 PPM1KQ8N3J5 372 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 SEMA4DQ92854 862 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 SLCO2A1Q92959 643 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 HVCN1Q96D96 273 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 BTBD6Q96KE9 485 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 IWS1Q96ST2 819 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 LRRC19Q9H756 370 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 AGO4Q9HCK5 861 aaKnown RBP17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 ACP6Q9NPH0 428 aa17.56■□□□□ 0.4
CLCNKA-203ENST00000439316 DNAJC8O75937 253 aaPredicted RBP17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 RWDD2BP57060 319 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 CDR2Q01850 454 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 AUHQ13825 339 aaKnown RBP17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 EAPPQ56P03 285 aaPredicted RBP17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 NOL9Q5SY16 702 aaKnown RBP17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 PIGWQ7Z7B1 504 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 FUKQ8N0W3 1084 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 HELQQ8TDG4 1101 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 ZC3H15Q8WU90 426 aaKnown RBP17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 PSPC1Q8WXF1 523 aaKnown RBP17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 JPH2Q9BR39 696 aaPredicted RBP17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 COQ4Q9Y3A0 265 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 UBIAD1Q9Y5Z9 338 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 CCT8L1PA6NM43 557 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 RASGRF2O14827 1237 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 CHUKO15111 745 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 ECEL1O95672 775 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 ICAM1P05362 532 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 CYP11B1P15538 503 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 HMGCS2P54868 508 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 MAP2K1Q02750 393 aaPredicted RBP17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 XRCC4Q13426 336 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 ITIH4Q14624 930 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 TKFCQ3LXA3 575 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 RNF207Q6ZRF8 634 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 RPAP3Q9H6T3 665 aaPredicted RBP17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 INTS9Q9NV88 658 aaKnown RBP17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 PTPN22Q9Y2R2 807 aa17.55■□□□□ 0.4
CLCNKA-203ENST00000439316 GOLGA8IPA6NC78 632 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 GOLGA8JA6NMD2 632 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 TULP1O00294 542 aaPredicted RBP17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 SLC16A4O15374 487 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 YWHABP31946 246 aaKnown RBP17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 PDE6CP51160 858 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 GPC3P51654 580 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 GHRHRQ02643 423 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 VGLL4Q14135 290 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 SNRNP35Q16560 246 aaKnown RBP17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 KRT39Q6A163 491 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 CYB5D1Q6P9G0 228 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 TRMT10CQ7L0Y3 403 aaKnown RBP17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 CCDC91Q7Z6B0 441 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 CBWD2Q8IUF1 395 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 LRRC34Q8IZ02 419 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 SLC17A8Q8NDX2 589 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 AGBL1Q96MI9 1066 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 ROPN1BQ9BZX4 212 aaPredicted RBP17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 ROPN1Q9HAT0 212 aaPredicted RBP17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 HAUS2Q9NVX0 235 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 CCPG1Q9ULG6 757 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 OTOFQ9HC10 1997 aa17.54■□□□□ 0.4
CLCNKA-203ENST00000439316 FSCN2O14926 492 aa17.53■□□□□ 0.4
CLCNKA-203ENST00000439316 ADSSP30520 456 aa17.53■□□□□ 0.4
CLCNKA-203ENST00000439316 KCNJ1P48048 391 aa17.53■□□□□ 0.4
CLCNKA-203ENST00000439316 PEX3P56589 373 aa17.53■□□□□ 0.4
CLCNKA-203ENST00000439316 CHADLQ6NUI6 762 aa17.53■□□□□ 0.4
CLCNKA-203ENST00000439316 UHMK1Q8TAS1 419 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms