RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 GSTA4O15217 222 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 MT-ND3P03897 115 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 SERPINB6P35237 376 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 TTC13Q8NBP0 860 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 PYROXD1Q8WU10 500 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 TUT1Q9H6E5 874 aaKnown RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 PXMP2Q9NR77 195 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 IFNAR2P48551 515 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 CDH6P55285 790 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 IRX4P78413 519 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 SNRNP35Q16560 246 aaKnown RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 MOB2Q70IA6 237 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 SLC35F6Q8N357 371 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 SLC7A14Q8TBB6 771 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 ZNF564Q8TBZ8 553 aaPredicted RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 USP33Q8TEY7 942 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 ABHD16BQ9H3Z7 469 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 DPP3Q9NY33 737 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.82□□□□□ -0.36
NEK1-201ENST00000439128 SLC25A13Q9UJS0 675 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 IGSF9BQ9UPX0 1349 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 SPTLC1O15269 473 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 SYNCRIPO60506 623 aaKnown RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 RNASEH1O60930 286 aaKnown RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 WEE1P30291 646 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 MAPRE1Q15691 268 aaKnown RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 ARHGAP18Q8N392 663 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 RDM1Q8NG50 284 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 GPT2Q8TD30 523 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 SCFD1Q8WVM8 642 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 TARS2Q9BW92 718 aaKnown RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 TRIM54Q9BYV2 358 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 DRC3Q9H069 523 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 DNAJC17Q9NVM6 304 aaKnown RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 BCAP29Q9UHQ4 241 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 ITGB3P05106 788 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 KRT7P08729 469 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 ATP2C1P98194 919 aaPredicted RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 SMAD1Q15797 465 aaKnown RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 MEI1Q5TIA1 1274 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 NFRKBQ6P4R8 1299 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 SCG3Q8WXD2 468 aaKnown RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 HPDLQ96IR7 371 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 PBKQ96KB5 322 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 DEFB118Q96PH6 123 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 KIFC3Q9BVG8 833 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 AP1M1Q9BXS5 423 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 PRR29P0C7W0 189 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.82□□□□□ -0.36
NEK1-201ENST00000439128 TRIM72Q6ZMU5 477 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 TRIM48Q8IWZ4 208 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 MRFAP1L1Q96HT8 127 aa12.82□□□□□ -0.36
NEK1-201ENST00000439128 GAS2L1Q99501 681 aaPredicted RBP12.82□□□□□ -0.36
NEK1-201ENST00000439128 NFIBO00712 420 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 CYP26A1O43174 497 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 TWF1Q12792 350 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 GRIK4Q16099 956 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 CYP4F11Q9HBI6 524 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 ANKEF1Q9NU02 776 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 POMCP01189 267 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 FAM200BP0CF97 657 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 CKBP12277 381 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 HSPA6P17066 643 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 IMPG1Q17R60 797 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 GOLGA7BQ2TAP0 167 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 DACT2Q5SW24 774 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 STOX1Q6ZVD7 989 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 IGDCC4Q8TDY8 1250 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 KIAA1683Q9H0B3 1180 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 KIDINS220Q9ULH0 1771 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 SYNDIG1LA6NDD5 238 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 CASTOR2A6NHX0 329 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 SOWAHDA6NJG2 315 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 HP1BP3Q5SSJ5 553 aaPredicted RBP12.81□□□□□ -0.36
NEK1-201ENST00000439128 CENPUQ71F23 418 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 PID1Q7Z2X4 250 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 CCDC170Q8IYT3 715 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 ATPAF2Q8N5M1 289 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 TBC1D19Q8N5T2 526 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 TRPM4Q8TD43 1214 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 CSGALNACT1Q8TDX6 532 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 C18orf8Q96DM3 657 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 LRGUKQ96M69 825 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 TSSK1BQ9BXA7 367 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 EHD4Q9H223 541 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 PARVAQ9NVD7 372 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 THG1LQ9NWX6 298 aaKnown RBP12.81□□□□□ -0.36
NEK1-201ENST00000439128 MAD2L2Q9UI95 211 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 PPP1R12AO14974 1030 aaPredicted RBP12.81□□□□□ -0.36
NEK1-201ENST00000439128 DDHD2O94830 711 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 TMCC1O94876 653 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
NEK1-201ENST00000439128 THP07101 528 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 MYBL1P10243 752 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 DEUP1Q05D60 604 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 LRRC8AQ8IWT6 810 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 DNERQ8NFT8 737 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 FBXO32Q969P5 355 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 CAPNS2Q96L46 248 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms