RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MAP7D3Q8IWC1 876 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 PPP1R14CQ8TAE6 165 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 HDAC7Q8WUI4 952 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 KIF12Q96FN5 646 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 FAM193BQ96PV7 902 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 NKRFO15226 690 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 C6orf222P0C671 652 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 DYNLT1P63172 113 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 JAG1P78504 1218 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 USP50Q70EL3 339 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 TRIM50Q86XT4 487 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 SLC35C1Q96A29 364 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 MTMR8Q96EF0 704 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 ATP8A1Q9Y2Q0 1164 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 RIPK3Q9Y572 518 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 M0R2N6 131 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 ASAP2O43150 1006 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 ECEL1O95672 775 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 GCLCP48506 637 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 ZNF280AP59817 542 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 ATF7IP2Q5U623 682 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 WDR93Q6P2C0 686 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 WDR59Q6PJI9 974 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 LRRC55Q6ZSA7 311 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 IRF2BP1Q8IU81 584 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 SLC35G2Q8TBE7 412 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 CLMNQ96JQ2 1002 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 POP1Q99575 1024 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 VPS37BQ9H9H4 285 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 NKIRAS1Q9NYS0 192 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 RTN2O75298 545 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 NAMPTP43490 491 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 DR1Q01658 176 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 EPC2Q52LR7 807 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 PPP1R21Q6ZMI0 780 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 CROCCP2Q86T23 111 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 MS4A14Q96JA4 679 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 GMLQ99445 158 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 HEMGNQ9BXL5 484 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 EHD2Q9NZN4 543 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 SYNGAP1Q96PV0 1343 aa12.33□□□□□ -0.43
TRAPPC9-202ENST00000438773 RGS16O15492 202 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 ATP5DP30049 168 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 NOP14P78316 857 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 ZRSR2Q15696 482 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 ARSHQ5FYA8 562 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 TRIM68Q6AZZ1 485 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 ACAP3Q96P50 834 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 NSRP1Q9H0G5 558 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 NGRNQ9NPE2 291 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 VAV3Q9UKW4 847 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 USP20Q9Y2K6 914 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 MYH7P12883 1935 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 H7C0C1 242 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 PDHXO00330 501 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 STK10O94804 968 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 SCP2P22307 547 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 ATP5OP48047 213 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 HSD17B4P51659 736 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 DHX9Q08211 1270 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 CCDC60Q8IWA6 550 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 BEST2Q8NFU1 509 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 COG1Q8WTW3 980 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 AGPSO00116 658 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 GAS2O43903 313 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 FECHP22830 423 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 PSMA2P25787 234 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 SLCO1A2P46721 670 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 CORO7P57737 925 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 NLRP11P59045 1033 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 MXRA7P84157 204 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 ACTN3Q08043 901 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 TRIP13Q15645 432 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 HYIQ5T013 277 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 RFX6Q8HWS3 928 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 SIAH1Q8IUQ4 282 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 ABI1Q8IZP0 508 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 LRRC4Q9HBW1 653 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 PRMT7Q9NVM4 692 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 CAPN6Q9Y6Q1 641 aa12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 ZC3H4Q9UPT8 1303 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-202ENST00000438773 CASZ1Q86V15 1759 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 TISP43B9A030 160 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 MAN1A1P33908 653 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 CDK17Q00537 523 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 CDO1Q16878 200 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 GLE1Q53GS7 698 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 MFSD14CQ5VZR4 134 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 CPA5Q8WXQ8 436 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 RUNDC3BQ96NL0 473 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.32□□□□□ -0.447e-6■■□□□ 12.2
TRAPPC9-202ENST00000438773 AGAP1Q9UPQ3 857 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 TTLL3Q9Y4R7 772 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 PCDHB2Q9Y5E7 798 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 FAM169AQ9Y6X4 670 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 CCDC160A6NGH7 325 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 A6NJR5 290 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 SGK1O00141 431 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 PPFIA4O75335 1185 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms