RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 SLC27A1Q6PCB7 646 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 C15orf39Q6ZRI6 1047 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 VSTM4Q8IW00 320 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 BRSK2Q8IWQ3 736 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 TMEM192Q8IY95 271 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 RDH13Q8NBN7 331 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 ANKRD20A12PQ8NF67 263 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 CCDC51Q96ER9 411 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 ERGIC2Q96RQ1 377 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 FAM213AQ9BRX8 229 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 NOC4LQ9BVI4 516 aaKnown RBP10.55□□□□□ -0.72
CUBN-204ENST00000438254 TRAIPQ9BWF2 469 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 TMX1Q9H3N1 280 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 ST3GAL5Q9UNP4 418 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 NOD1Q9Y239 953 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 SIK3Q9Y2K2 1263 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.55□□□□□ -0.72
CUBN-204ENST00000438254 ITIH6Q6UXX5 1313 aa10.55□□□□□ -0.72
CUBN-204ENST00000438254 GTPBP10A4D1E9 387 aaKnown RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 ZNF233A6NK53 670 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 LRRIQ3A6PVS8 624 aaPredicted RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 GPR182O15218 404 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 TLR3O15455 904 aaKnown RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 MGEA5O60502 916 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 PQBP1O60828 265 aaKnown RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 RPS6KA5O75582 802 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 TRIM49P0CI25 452 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 TRIM49CP0CI26 452 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 GHRP10912 638 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 SELPP16109 830 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 ANK1P16157 1881 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 GRM5P41594 1212 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 VAMP7P51809 220 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 PLCB2Q00722 1185 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 TLE2Q04725 743 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 PPP3CAQ08209 521 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 KCNMA1Q12791 1236 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 TBX2Q13207 712 aaPredicted RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 BFSP2Q13515 415 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 HSP90AA2PQ14568 343 aaPredicted RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 ENOX2Q16206 610 aaKnown RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 LRRC26Q2I0M4 334 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 DCAF4L1Q3SXM0 396 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 CBWD6Q4V339 395 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 SEZ6Q53EL9 994 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 CBWD3Q5JTY5 395 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 CBWD5Q5RIA9 395 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 LRRC8DQ7L1W4 858 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 ZBTB33Q86T24 672 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 ZNF516Q92618 1163 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 VWCEQ96DN2 955 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 EIF2AQ9BY44 585 aaKnown RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 WNT8AQ9H1J5 351 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 CHST12Q9NRB3 414 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 RBAKQ9NYW8 714 aaPredicted RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 TSR3Q9UJK0 312 aaKnown RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 PADI3Q9ULW8 664 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 KIAA0100Q14667 2235 aaKnown RBP10.54□□□□□ -0.72
CUBN-204ENST00000438254 PTPRJQ12913 1337 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 UMODL1Q5DID0 1318 aa10.54□□□□□ -0.72
CUBN-204ENST00000438254 RALGAPA2Q2PPJ7 1873 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 TTC26A0AVF1 554 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 NBNO60934 754 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 AFPP02771 609 aaKnown RBP10.53□□□□□ -0.72
CUBN-204ENST00000438254 CXCL10P02778 98 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 CLTAP09496 248 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 STAG3L1P0CL83 205 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 CD52P31358 61 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 GTF2H1P32780 548 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 FMO5P49326 533 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 KYAT1Q16773 422 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 PTPN21Q16825 1174 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 SLC10A6Q3KNW5 377 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 FILIP1LQ4L180 1135 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 XKR4Q5GH76 650 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 ALKAL1Q6UXT8 129 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 FAM43BQ6ZT52 329 aaPredicted RBP10.53□□□□□ -0.72
CUBN-204ENST00000438254 NECAB2Q7Z6G3 386 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 CCDC155Q8N6L0 562 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 SMG8Q8ND04 991 aaKnown RBP10.53□□□□□ -0.72
CUBN-204ENST00000438254 LMO3Q8TAP4 145 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 ADPGKQ9BRR6 497 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 TCHPQ9BT92 498 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 TTYH3Q9C0H2 523 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 TMEM117Q9H0C3 514 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 PDE11AQ9HCR9 933 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 PIN4Q9Y237 131 aaKnown RBP10.53□□□□□ -0.72
CUBN-204ENST00000438254 COQ4Q9Y3A0 265 aa10.53□□□□□ -0.72
CUBN-204ENST00000438254 DCDC2CA8MYV0 355 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 P4HA2O15460 535 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 ZNF623O75123 536 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 NPTXRO95502 500 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 C4BPAP04003 597 aaKnown RBP10.52□□□□□ -0.73
CUBN-204ENST00000438254 TPM3P06753 285 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 HARSP12081 509 aaKnown RBP10.52□□□□□ -0.73
CUBN-204ENST00000438254 KRT13P13646 458 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 EN2P19622 333 aaPredicted RBP10.52□□□□□ -0.73
CUBN-204ENST00000438254 UBXN1Q04323 297 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 NCBP1Q09161 790 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms