RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 NAB2Q15742 525 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 SEZ6Q53EL9 994 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 CES5AQ6NT32 575 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 HAUS6Q7Z4H7 955 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 GLYCTKQ8IVS8 523 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 RIN2Q8WYP3 895 aaPredicted RBP20.06■□□□□ 0.8
HMGN1-207ENST00000436324 FBXL18Q96ME1 805 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 PANK2Q9BZ23 570 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 DZANK1Q9NVP4 752 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 SSX2IPQ9Y2D8 614 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 K7ENM7 598 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 ABLIM1O14639 778 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 TEX28O15482 410 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 TBCAO75347 108 aaKnown RBP20.05■□□□□ 0.8
HMGN1-207ENST00000436324 TXLNAP40222 546 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 CLCN4P51793 760 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 NCKAP1LP55160 1127 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 USP41Q3LFD5 358 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 FOXD4L6Q3SYB3 417 aaPredicted RBP20.05■□□□□ 0.8
HMGN1-207ENST00000436324 RRAGBQ5VZM2 374 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 TMC5Q6UXY8 1006 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 FOXD4L3Q6VB84 417 aaPredicted RBP20.05■□□□□ 0.8
HMGN1-207ENST00000436324 CEP57Q86XR8 500 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 RNF135Q8IUD6 432 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 KRI1Q8N9T8 703 aaKnown RBP20.05■□□□□ 0.8
HMGN1-207ENST00000436324 FEZF2Q8TBJ5 459 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 ACAP3Q96P50 834 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 PPP1R10Q96QC0 940 aaKnown RBP20.05■□□□□ 0.8
HMGN1-207ENST00000436324 ADAM7Q9H2U9 754 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 PARVGQ9HBI0 331 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 GOLGA2P5Q9HBQ8 144 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 TOPORSQ9NS56 1045 aaPredicted RBP20.05■□□□□ 0.8
HMGN1-207ENST00000436324 CHST7Q9NS84 486 aa20.05■□□□□ 0.8
HMGN1-207ENST00000436324 SMIM28A0A1B0GU29 152 aa20.04■□□□□ 0.8
HMGN1-207ENST00000436324 H0YCG3 227 aa20.04■□□□□ 0.8
HMGN1-207ENST00000436324 TOM1L1O75674 476 aa20.04■□□□□ 0.8
HMGN1-207ENST00000436324 ADH1AP07327 375 aa20.04■□□□□ 0.8
HMGN1-207ENST00000436324 RPL17P18621 184 aaKnown RBP20.04■□□□□ 0.8
HMGN1-207ENST00000436324 IGFBP6P24592 240 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-207ENST00000436324 ITIH3Q06033 890 aa20.04■□□□□ 0.8
HMGN1-207ENST00000436324 NOLC1Q14978 699 aaKnown RBP eCLIP20.04■□□□□ 0.86e-31■□□□□ 9.8
HMGN1-207ENST00000436324 FAM171A1Q5VUB5 890 aa20.04■□□□□ 0.8
HMGN1-207ENST00000436324 DYMQ7RTS9 669 aa20.04■□□□□ 0.8
HMGN1-207ENST00000436324 PALB2Q86YC2 1186 aa20.04■□□□□ 0.8
HMGN1-207ENST00000436324 RXFP1Q9HBX9 757 aa20.04■□□□□ 0.8
HMGN1-207ENST00000436324 TSHZ2Q9NRE2 1034 aa20.04■□□□□ 0.8
HMGN1-207ENST00000436324 MUTYHQ9UIF7 546 aa20.04■□□□□ 0.8
HMGN1-207ENST00000436324 SF3B1O75533 1304 aaKnown RBP eCLIP20.03■□□□□ 0.84e-6■□□□□ 8.6
HMGN1-207ENST00000436324 LOC730098B7Z3J9 87 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 CLDN3O15551 220 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 DCXO43602 365 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 TRAK2O60296 914 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 SPATA31D3P0C874 917 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 ALADP13716 330 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 NMT1P30419 496 aaKnown RBP20.03■□□□□ 0.8
HMGN1-207ENST00000436324 NASPP49321 788 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-207ENST00000436324 CLCNKBP51801 687 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 ZNF131P52739 623 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 PRSS55Q6UWB4 352 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-207ENST00000436324 ZPBP2Q6X784 338 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 SPATA31D4Q6ZUB0 917 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 SNX27Q96L92 541 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 ZNF396Q96N95 335 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-207ENST00000436324 POMKQ9H5K3 350 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 MAN1C1Q9NR34 630 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 STK17AQ9UEE5 414 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 TBX20Q9UMR3 447 aa20.03■□□□□ 0.8
HMGN1-207ENST00000436324 BDP1A6H8Y1 2624 aa20.02■□□□□ 0.8
HMGN1-207ENST00000436324 B3GAT3O94766 335 aa20.02■□□□□ 0.8
HMGN1-207ENST00000436324 BRD1O95696 1058 aa20.02■□□□□ 0.8
HMGN1-207ENST00000436324 LIG4P49917 911 aa20.02■□□□□ 0.8
HMGN1-207ENST00000436324 SOX4Q06945 474 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-207ENST00000436324 TMEM31Q5JXX7 168 aa20.02■□□□□ 0.8
HMGN1-207ENST00000436324 RTP2Q5QGT7 225 aa20.02■□□□□ 0.8
HMGN1-207ENST00000436324 ALKAL1Q6UXT8 129 aa20.02■□□□□ 0.8
HMGN1-207ENST00000436324 LINC00301Q8NCQ3 95 aa20.02■□□□□ 0.8
HMGN1-207ENST00000436324 RIPOR3Q96MK2 946 aa20.02■□□□□ 0.8
HMGN1-207ENST00000436324 ZMAT2Q96NC0 199 aaKnown RBP20.02■□□□□ 0.8
HMGN1-207ENST00000436324 TTPALQ9BTX7 342 aa20.02■□□□□ 0.8
HMGN1-207ENST00000436324 HAPLN2Q9GZV7 340 aa20.02■□□□□ 0.8
HMGN1-207ENST00000436324 DAXXQ9UER7 740 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-207ENST00000436324 MYMKA6NI61 221 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 SPTLC2O15270 562 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 MEFVO15553 781 aaPredicted RBP20.01■□□□□ 0.79
HMGN1-207ENST00000436324 GLUD1P00367 558 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 ZSCAN22P10073 491 aaPredicted RBP20.01■□□□□ 0.79
HMGN1-207ENST00000436324 MTHFRP42898 656 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 MCL1Q07820 350 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 XKR4Q5GH76 650 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 ATAT1Q5SQI0 421 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 DCLRE1AQ6PJP8 1040 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 SV2BQ7L1I2 683 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 PDILTQ8N807 584 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 C18orf25Q96B23 403 aaPredicted RBP20.01■□□□□ 0.79
HMGN1-207ENST00000436324 LRFN3Q9BTN0 628 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 SFXN1Q9H9B4 322 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 C11orf16Q9NQ32 467 aa20.01■□□□□ 0.79
HMGN1-207ENST00000436324 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.01■□□□□ 0.79
HMGN1-207ENST00000436324 A0A087X0B3 334 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 I3L4J1 428 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms