RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 C1orf228Q6PIY5 440 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 ATG14Q6ZNE5 492 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 TOGARAM2Q6ZUX3 1019 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 Q6ZVL8 140 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 SPICE1Q8N0Z3 855 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 CARFQ8N187 725 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 SH2D3CQ8N5H7 860 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 TXNDC5Q8NBS9 432 aaKnown RBP5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 HOXB13Q92826 284 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 APIPQ96GX9 242 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 SAMD11Q96NU1 681 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 VRK1Q99986 396 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 PDCD2LQ9BRP1 358 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 LRFN3Q9BTN0 628 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 BHMT2Q9H2M3 363 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 ZNF287Q9HBT7 754 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 PLCB1Q9NQ66 1216 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 SIDT1Q9NXL6 827 aaKnown RBP5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 ING3Q9NXR8 418 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 NCDNQ9UBB6 729 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 AJAP1Q9UKB5 411 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 DMTF1Q9Y222 760 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 NR2E1Q9Y466 385 aa5.57□□□□□ -1.52
HMGB1P45-201ENST00000435986 C2orf78A6NCI8 922 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 ARHGAP6O43182 974 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 SASH1O94885 1247 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 TSPAN15O95858 294 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 FOSP01100 380 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 MTHFD1P11586 935 aaKnown RBP5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 CSF2RBP32927 897 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 NKX6-1P78426 367 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 PKN1Q16512 942 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 SLC44A4Q53GD3 710 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 HSP90AB4PQ58FF6 505 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 KHDC1LQ5JSQ8 128 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 LARP4Q71RC2 724 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 PLEKHH3Q7Z736 793 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 CMTM4Q8IZR5 234 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 MSL3Q8N5Y2 521 aaKnown RBP5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 ANKRD53Q8N9V6 530 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 NLGN4YQ8NFZ3 816 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 PARD3BQ8TEW8 1205 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 RABGGTAQ92696 567 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 ARL8AQ96BM9 186 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 MRGPRX4Q96LA9 322 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 NAA15Q9BXJ9 866 aaKnown RBP5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 PNPLA8Q9NP80 782 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 PADI4Q9UM07 663 aa5.56□□□□□ -1.52
HMGB1P45-201ENST00000435986 PMS2P1A4D2B8 440 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 MROH6A6NGR9 719 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 RAP2AP10114 183 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 SLC7A1P30825 629 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 SLC6A9P48067 706 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 FLT3LGP49771 235 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 GZMKP49863 264 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 ATP2C1P98194 919 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 APBA1Q02410 837 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 TLE1Q04724 770 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 TARDBPQ13148 414 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 PLS1Q14651 629 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 GRAMD1BQ3KR37 738 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 FLYWCH1Q4VC44 716 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 FAM47AQ5JRC9 791 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 C10orf62Q5T681 223 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 IFI44Q8TCB0 444 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 ADAMTS17Q8TE56 1095 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 PHKBQ93100 1093 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 IL17RAQ96F46 866 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 SLC39A13Q96H72 371 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 ZC3H10Q96K80 434 aaKnown RBP5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 TBCBQ99426 244 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 ARPC5LQ9BPX5 153 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 SPATA25Q9BR10 227 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 UNKQ9C0B0 810 aaKnown RBP5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 KIAA1683Q9H0B3 1180 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 C11orf54Q9H0W9 315 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 TAGLN3Q9UI15 199 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 SMG5Q9UPR3 1016 aaKnown RBP5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 CLCA2Q9UQC9 943 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 SIK3Q9Y2K2 1263 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 LRCH1Q9Y2L9 728 aa5.55□□□□□ -1.52
HMGB1P45-201ENST00000435986 DBX1A6NMT0 343 aa5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 SNRPA1P09661 255 aaKnown RBP5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 ALAS1P13196 640 aa5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 BRAFP15056 766 aa5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 KCNJ5P48544 419 aa5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 AFF3P51826 1226 aaKnown RBP5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 ADCY7P51828 1080 aa5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 SNAPC2Q13487 334 aa5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 NFYCQ13952 458 aa5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 HABP2Q14520 560 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 PABPC1LQ4VXU2 614 aaKnown RBP5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 ZNF572Q7Z3I7 529 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 TRMT2AQ8IZ69 625 aaKnown RBP5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 OR14K1Q8NGZ2 314 aa5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 DEPTORQ8TB45 409 aa5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 MDM1Q8TC05 714 aa5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 ZNF526Q8TF50 670 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 RPL10LQ96L21 214 aaKnown RBP5.54□□□□□ -1.52
HMGB1P45-201ENST00000435986 APOL5Q9BWW9 433 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms