RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 PIAS3Q9Y6X2 628 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 PDCD11Q14690 1871 aaKnown RBP11.65□□□□□ -0.54
CPNE1-214ENST00000435747 CFAP46Q8IYW2 2715 aa11.65□□□□□ -0.55
CPNE1-214ENST00000435747 NUP205Q92621 2012 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 ZNF623O75123 536 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 RPP40O75818 363 aaKnown RBP11.64□□□□□ -0.55
CPNE1-214ENST00000435747 POMCP01189 267 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 CCDC192P0DO97 292 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 RPL17P18621 184 aaKnown RBP11.64□□□□□ -0.55
CPNE1-214ENST00000435747 SETQ01105 290 aaPredicted RBP11.64□□□□□ -0.55
CPNE1-214ENST00000435747 CREMQ03060 361 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 PTGDRQ13258 359 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 LRRC32Q14392 662 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 GRM2Q14416 872 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 SWSAP1Q6NVH7 229 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 MIS18BP1Q6P0N0 1132 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 B3GNT9Q6UX72 402 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 KBTBD6Q86V97 674 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 LINC01465Q8N7H1 131 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 DAGLBQ8NCG7 672 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 CCDC148Q8NFR7 591 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 ELSPBP1Q96BH3 223 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 MBOAT7Q96N66 472 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 AIFM3Q96NN9 605 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 LARP6Q9BRS8 491 aaKnown RBP11.64□□□□□ -0.55
CPNE1-214ENST00000435747 GCOM2Q9BZD3 368 aaPredicted RBP11.64□□□□□ -0.55
CPNE1-214ENST00000435747 KCNH3Q9ULD8 1083 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 SHROOM3Q8TF72 1996 aa11.64□□□□□ -0.55
CPNE1-214ENST00000435747 TDRD15B5MCY1 1934 aaKnown RBP11.64□□□□□ -0.55
CPNE1-214ENST00000435747 MSH4O15457 936 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 C8AP07357 584 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 SFPQP23246 707 aaKnown RBP eCLIP11.63□□□□□ -0.558e-7■□□□□ 11.1
CPNE1-214ENST00000435747 HOXA6P31267 233 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 AFF1P51825 1210 aaKnown RBP11.63□□□□□ -0.55
CPNE1-214ENST00000435747 SCRN1Q12765 414 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 PABPC1LQ4VXU2 614 aaKnown RBP11.63□□□□□ -0.55
CPNE1-214ENST00000435747 TANGO2Q6ICL3 276 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 ZNF746Q6NUN9 644 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-214ENST00000435747 AGMOQ6ZNB7 445 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 FAM177A1Q8N128 213 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-214ENST00000435747 IRF7Q92985 503 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 MCRS1Q96EZ8 462 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 B3GALT6Q96L58 329 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 ZNF577Q9BSK1 485 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 RSAD1Q9HA92 442 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 CHST7Q9NS84 486 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 TBC1D22BQ9NU19 505 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 MRPS23Q9Y3D9 190 aaKnown RBP11.63□□□□□ -0.55
CPNE1-214ENST00000435747 COL4A2P08572 1712 aa11.63□□□□□ -0.55
CPNE1-214ENST00000435747 CNTNAP2Q9UHC6 1331 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 EML5Q05BV3 1969 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 CYP3A7-CYP3A51PA0A087WV96 503 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 DEXIO95424 95 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 CTDNEP1O95476 244 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 EFEMP2O95967 443 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 NEFLP07196 543 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 CYP3A7P24462 503 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 CCNE1P24864 410 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 HOXA9P31269 272 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 USP11P51784 963 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 ANAPC15P60006 121 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 USP41Q3LFD5 358 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 PRR16Q569H4 304 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 GPR65Q8IYL9 337 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 DEFB124Q8NES8 71 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 BICD2Q8TD16 824 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 SLC5A5Q92911 643 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 TRMT61BQ9BVS5 477 aaKnown RBP11.62□□□□□ -0.55
CPNE1-214ENST00000435747 RBM12Q9NTZ6 932 aaKnown RBP11.62□□□□□ -0.55
CPNE1-214ENST00000435747 PDRG1Q9NUG6 133 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 GDE1Q9NZC3 331 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 TPCN1Q9ULQ1 816 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 PCDHA4Q9UN74 947 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 PCDHB2Q9Y5E7 798 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 ATG2BQ96BY7 2078 aa11.62□□□□□ -0.55
CPNE1-214ENST00000435747 PIEZO2Q9H5I5 2752 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 ZNF862O60290 1169 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 PFKFB2O60825 505 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 NR1I2O75469 434 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 ZNF76P36508 570 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 AKAP17AQ02040 695 aaKnown RBP11.61□□□□□ -0.55
CPNE1-214ENST00000435747 Q4G0T1 1027 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 Q6ZS52 159 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 SMAP1Q8IYB5 467 aaPredicted RBP11.61□□□□□ -0.55
CPNE1-214ENST00000435747 COLGALT2Q8IYK4 626 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 HNRNPLLQ8WVV9 542 aaKnown RBP11.61□□□□□ -0.55
CPNE1-214ENST00000435747 ZNF334Q9HCZ1 680 aaPredicted RBP11.61□□□□□ -0.55
CPNE1-214ENST00000435747 TMEM9BQ9NQ34 198 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 HCFC1R1Q9NWW0 138 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 C2orf42Q9NWW7 574 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 DACH1Q9UI36 760 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 GON4LQ3T8J9 2241 aa11.61□□□□□ -0.55
CPNE1-214ENST00000435747 STK36Q9NRP7 1315 aa11.6□□□□□ -0.55
CPNE1-214ENST00000435747 ABCA7Q8IZY2 2146 aa11.6□□□□□ -0.55
CPNE1-214ENST00000435747 LNP1A1A4G5 178 aa11.6□□□□□ -0.55
CPNE1-214ENST00000435747 F8W810 466 aa11.6□□□□□ -0.55
CPNE1-214ENST00000435747 PSMD10O75832 226 aa11.6□□□□□ -0.55
CPNE1-214ENST00000435747 AKAP3O75969 853 aa11.6□□□□□ -0.55
CPNE1-214ENST00000435747 STBD1O95210 358 aa11.6□□□□□ -0.55
CPNE1-214ENST00000435747 CAVIN2O95810 425 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms