RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SOD2P04179 222 aa17.77■□□□□ 0.44
SMPD4-207ENST00000435455 HSP90AA2PQ14568 343 aaPredicted RBP17.77■□□□□ 0.44
SMPD4-207ENST00000435455 NAB2Q15742 525 aa17.77■□□□□ 0.44
SMPD4-207ENST00000435455 XKR4Q5GH76 650 aa17.77■□□□□ 0.44
SMPD4-207ENST00000435455 HERC4Q5GLZ8 1057 aaPredicted RBP17.77■□□□□ 0.44
SMPD4-207ENST00000435455 PTCRAQ6ISU1 281 aaPredicted RBP17.77■□□□□ 0.44
SMPD4-207ENST00000435455 ZNF720Q7Z2F6 126 aa17.77■□□□□ 0.44
SMPD4-207ENST00000435455 CCDC65Q8IXS2 484 aa17.77■□□□□ 0.44
SMPD4-207ENST00000435455 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.77■□□□□ 0.44
SMPD4-207ENST00000435455 SNX27Q96L92 541 aa17.77■□□□□ 0.44
SMPD4-207ENST00000435455 PPP1R10Q96QC0 940 aaKnown RBP17.77■□□□□ 0.44
SMPD4-207ENST00000435455 SCAND2PQ9GZW5 306 aaPredicted RBP17.77■□□□□ 0.44
SMPD4-207ENST00000435455 MRPL44Q9H9J2 332 aaKnown RBP17.77■□□□□ 0.44
SMPD4-207ENST00000435455 OLFML3Q9NRN5 406 aa17.77■□□□□ 0.44
SMPD4-207ENST00000435455 CD207Q9UJ71 328 aa17.77■□□□□ 0.44
SMPD4-207ENST00000435455 SSX2IPQ9Y2D8 614 aa17.77■□□□□ 0.44
SMPD4-207ENST00000435455 PDCD11Q14690 1871 aaKnown RBP17.76■□□□□ 0.43
SMPD4-207ENST00000435455 SMIM28A0A1B0GU29 152 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 FRMD3A2A2Y4 597 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 CASTOR2A6NHX0 329 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 TADA2AO75478 443 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 GLP2RO95838 553 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 EFEMP2O95967 443 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 URODP06132 367 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 CLTAP09496 248 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 DLX2Q07687 328 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-207ENST00000435455 ALCAMQ13740 583 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 PTPN14Q15678 1187 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 ZC2HC1CQ53FD0 456 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-207ENST00000435455 ALKAL1Q6UXT8 129 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 AUTS2Q8WXX7 1259 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 MSLNLQ96KJ4 702 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 UROC1Q96N76 676 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 UHRF1Q96T88 793 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-207ENST00000435455 CXCL16Q9H2A7 254 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 MRPL17Q9NRX2 175 aaKnown RBP17.76■□□□□ 0.43
SMPD4-207ENST00000435455 SLC38A7Q9NVC3 462 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 PANK4Q9NVE7 773 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 PCDHB13Q9Y5F0 798 aa17.76■□□□□ 0.43
SMPD4-207ENST00000435455 SF3B1O75533 1304 aaKnown RBP eCLIP17.75■□□□□ 0.432e-10■■■■■ 48.1
SMPD4-207ENST00000435455 GRXCR2A6NFK2 248 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 F8W810 466 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 OGTO15294 1046 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 KCNE1P15382 129 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 NUCB2P80303 420 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 COASYQ13057 564 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 KCNC3Q14003 757 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 USP41Q3LFD5 358 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 GLRA4Q5JXX5 417 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 ADALQ6DHV7 355 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 FUT10Q6P4F1 479 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 CNNM4Q6P4Q7 775 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 TMEM184AQ6ZMB5 413 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 GPR65Q8IYL9 337 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 RNF168Q8IYW5 571 aaPredicted RBP17.75■□□□□ 0.43
SMPD4-207ENST00000435455 STAMQ92783 540 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 CASP10Q92851 521 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 STRA6Q9BX79 667 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 EMILIN2Q9BXX0 1053 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 TRIM9Q9C026 710 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 PLEKHA5Q9HAU0 1116 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 CLEC1BQ9P126 229 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 CNTN3Q9P232 1028 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 KCNH3Q9ULD8 1083 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 EXOC7Q9UPT5 735 aa17.75■□□□□ 0.43
SMPD4-207ENST00000435455 A0A0B4J269 797 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 CLASP2O75122 1294 aaKnown RBP17.74■□□□□ 0.43
SMPD4-207ENST00000435455 PPP1R37O75864 691 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 CMA1P23946 247 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 GLUD2P49448 558 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 ASIC1P78348 528 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 ELAVL2Q12926 359 aaKnown RBP17.74■□□□□ 0.43
SMPD4-207ENST00000435455 SMAD4Q13485 552 aaKnown RBP17.74■□□□□ 0.43
SMPD4-207ENST00000435455 CLUL1Q15846 466 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 SLFN12LQ6IEE8 588 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 KIAA1841Q6NSI8 718 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 PPFIBP1Q86W92 1011 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 VN1R2Q8NFZ6 395 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 ACCSQ96QU6 501 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 PAAF1Q9BRP4 392 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 MSTO1Q9BUK6 570 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 HAPLN2Q9GZV7 340 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 TBC1D7Q9P0N9 293 aa17.74■□□□□ 0.43
SMPD4-207ENST00000435455 BARX2Q9UMQ3 279 aaPredicted RBP17.74■□□□□ 0.43
SMPD4-207ENST00000435455 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.74■□□□□ 0.43
SMPD4-207ENST00000435455 TMEM189-UBE2V1I3L0A0 370 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 LILRB3O75022 631 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 GCNT3O95395 438 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 HOXB8P17481 243 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-207ENST00000435455 DSG1Q02413 1049 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 SLC10A6Q3KNW5 377 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 SEZ6Q53EL9 994 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 L1TD1Q5T7N2 865 aaKnown RBP17.73■□□□□ 0.43
SMPD4-207ENST00000435455 LLGL2Q6P1M3 1020 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 SLC39A4Q6P5W5 647 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 STXBP4Q6ZWJ1 553 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 TAS1R1Q7RTX1 841 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 CEP57L1Q8IYX8 460 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 SMRP1Q8NCR6 262 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 RABGGTAQ92696 567 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms