RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 CALCRLQ16602 461 aa12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 RSPO4Q2I0M5 234 aaPredicted RBP12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 AXDND1Q5T1B0 1012 aaPredicted RBP12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 PDXDC1Q6P996 788 aa12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 ZBTB8OSQ8IWT0 167 aa12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 DDX23Q9BUQ8 820 aaKnown RBP12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 TTC12Q9H892 705 aaPredicted RBP12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 PRMT7Q9NVM4 692 aaPredicted RBP12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 HCFC1R1Q9NWW0 138 aa12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 DLL3Q9NYJ7 618 aa12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 FBXO4Q9UKT5 387 aa12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 TTLL13PA6NNM8 815 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 PTGESO14684 152 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 N4BP3O15049 544 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 LIG1P18858 919 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 OR1D2P34982 312 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 KRT2P35908 639 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 PFKPQ01813 784 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 ELAVL2Q12926 359 aaKnown RBP12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 ZNF528Q3MIS6 628 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 VARS2Q5ST30 1063 aaKnown RBP12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 PPP4R3CPQ6ZMV5 832 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 ATRIPQ8WXE1 791 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 ING5Q8WYH8 240 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 PRIMPOLQ96LW4 560 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 OSBPL6Q9BZF3 934 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 CXCL16Q9H2A7 254 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 BRMS1Q9HCU9 246 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 LTB4R2Q9NPC1 389 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 DNMT3BQ9UBC3 853 aaKnown RBP12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 ORC3Q9UBD5 711 aaPredicted RBP12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 DCHS1Q96JQ0 3298 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 DMDP11532 3685 aa12.82□□□□□ -0.36
CHRNA1-207ENST00000435083 SPTLC1O15269 473 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 RECQL4O94761 1208 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 RAB33AQ14088 237 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 UVSSAQ2YD98 709 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 PABPC1LQ4VXU2 614 aaKnown RBP12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 ZBTB41Q5SVQ8 909 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 RSPO2Q6UXX9 243 aaPredicted RBP12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 NOSTRINQ8IVI9 506 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 NPAS3Q8IXF0 933 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 MCRS1Q96EZ8 462 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 BORCS6Q96GS4 357 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 FZD8Q9H461 694 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 PDZD7Q9H5P4 517 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 USP20Q9Y2K6 914 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 PATJQ8NI35 1801 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 EPB41L2O43491 1005 aaKnown RBP12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 ATP2B1P20020 1258 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 PRPF4BQ13523 1007 aaKnown RBP12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 NAB2Q15742 525 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 FAM187BQ17R55 369 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 TPRG1Q6ZUI0 275 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 WASF1Q92558 559 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 ADPGKQ9BRR6 497 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 KCNH3Q9ULD8 1083 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 TPCN1Q9ULQ1 816 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 GDAQ9Y2T3 454 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 MRPS23Q9Y3D9 190 aaKnown RBP12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 PCDHGA2Q9Y5H1 932 aa12.81□□□□□ -0.36
CHRNA1-207ENST00000435083 ZNF292O60281 2723 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 VWA8A3KMH1 1905 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 CACNA1AO00555 2505 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 NCAM2O15394 837 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 NEMFO60524 1076 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 PFKFB2O60825 505 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 CTDNEP1O95476 244 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 PRKCBP05771 671 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 FGFR3P22607 806 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 TARSP26639 723 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 MAGEA9P43362 315 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 MAPK6Q16659 721 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 CDCA2Q69YH5 1023 aaPredicted RBP12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 TSSK4Q6SA08 328 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 MCPH1Q8NEM0 835 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 TNFRSF25Q93038 417 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 SECISBP2LQ93073 1101 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 NELL2Q99435 816 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 PLA2G2FQ9BZM2 168 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 C2orf40Q9H1Z8 148 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 MTRRQ9UBK8 725 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 CDY1Q9Y6F8 540 aa12.8□□□□□ -0.36
CHRNA1-207ENST00000435083 OTOGLQ3ZCN5 2332 aa12.79□□□□□ -0.36
CHRNA1-207ENST00000435083 B3GAT3O94766 335 aa12.79□□□□□ -0.36
CHRNA1-207ENST00000435083 POU2F2P09086 479 aa12.79□□□□□ -0.36
CHRNA1-207ENST00000435083 IGFBP6P24592 240 aaPredicted RBP12.79□□□□□ -0.36
CHRNA1-207ENST00000435083 GLRA4Q5JXX5 417 aa12.79□□□□□ -0.36
CHRNA1-207ENST00000435083 EEF1DP3Q658K8 133 aa12.79□□□□□ -0.36
CHRNA1-207ENST00000435083 GPR161Q8N6U8 529 aaKnown RBP12.79□□□□□ -0.36
CHRNA1-207ENST00000435083 BSNDQ8WZ55 320 aa12.79□□□□□ -0.36
CHRNA1-207ENST00000435083 ZSCAN32Q9NX65 697 aa12.79□□□□□ -0.36
CHRNA1-207ENST00000435083 SMG5Q9UPR3 1016 aaKnown RBP12.79□□□□□ -0.36
CHRNA1-207ENST00000435083 NOTCH4Q99466 2003 aa12.79□□□□□ -0.36
CHRNA1-207ENST00000435083 BTBD18B2RXH4 712 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 I3L4J1 428 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 ACKR2O00590 384 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 WNT7AO00755 349 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms