RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 RCCD1A6NED2 376 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 PSMD10O75832 226 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 SNAI1O95863 264 aaPredicted RBP13.03□□□□□ -0.32
SNHG20-202ENST00000434411 HSD17B4P51659 736 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 CSE1LP55060 971 aaKnown RBP13.03□□□□□ -0.32
SNHG20-202ENST00000434411 CNTN2Q02246 1040 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 CYP4A11Q02928 519 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 GIT2Q14161 759 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 CASP8Q14790 479 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 MYBPC3Q14896 1274 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 LRRC23Q53EV4 343 aaPredicted RBP13.03□□□□□ -0.32
SNHG20-202ENST00000434411 PAPD7Q5XG87 772 aaKnown RBP13.03□□□□□ -0.32
SNHG20-202ENST00000434411 WDR93Q6P2C0 686 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 NIPA1Q7RTP0 329 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 CACNA2D4Q7Z3S7 1137 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 RNF180Q86T96 592 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 C7orf61Q8IZ16 206 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 UIMC1Q96RL1 719 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 MMS19Q96T76 1030 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 RIT2Q99578 217 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 REEP2Q9BRK0 252 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 LACRTQ9GZZ8 138 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 BHMT2Q9H2M3 363 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 MMRN2Q9H8L6 949 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
SNHG20-202ENST00000434411 CYP39A1Q9NYL5 469 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 VPS18Q9P253 973 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 ADAM21Q9UKJ8 722 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 PCDHA2Q9Y5H9 948 aa13.03□□□□□ -0.32
SNHG20-202ENST00000434411 MYH11P35749 1972 aa13.02□□□□□ -0.32
SNHG20-202ENST00000434411 TAL1P17542 331 aaPredicted RBP13.02□□□□□ -0.33
SNHG20-202ENST00000434411 MATR3P43243 847 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNHG20-202ENST00000434411 CYP27A1Q02318 531 aa13.02□□□□□ -0.33
SNHG20-202ENST00000434411 CKAP4Q07065 602 aaKnown RBP13.02□□□□□ -0.33
SNHG20-202ENST00000434411 ACVR2BQ13705 512 aa13.02□□□□□ -0.33
SNHG20-202ENST00000434411 ARMCX2Q7L311 632 aa13.02□□□□□ -0.33
SNHG20-202ENST00000434411 NELFCDQ8IXH7 590 aa13.02□□□□□ -0.33
SNHG20-202ENST00000434411 DCLK2Q8N568 766 aa13.02□□□□□ -0.33
SNHG20-202ENST00000434411 CAGE1Q8TC20 777 aa13.02□□□□□ -0.33
SNHG20-202ENST00000434411 CCDC42Q96M95 316 aa13.02□□□□□ -0.33
SNHG20-202ENST00000434411 OLFML3Q9NRN5 406 aa13.02□□□□□ -0.33
SNHG20-202ENST00000434411 TUBGCP4Q9UGJ1 667 aa13.02□□□□□ -0.33
SNHG20-202ENST00000434411 MAFFQ9ULX9 164 aa13.02□□□□□ -0.33
SNHG20-202ENST00000434411 PLAGL2Q9UPG8 496 aa13.02□□□□□ -0.33
SNHG20-202ENST00000434411 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 MEIS1O00470 390 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 PDXKO00764 312 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 NKRFO15226 690 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 USO1O60763 962 aaKnown RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 FAM13AO94988 1023 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 HNRNPH3P31942 346 aaKnown RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 SLC8A3P57103 927 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 KNOP1Q1ED39 458 aaKnown RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 ARSHQ5FYA8 562 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 SEPT14Q6ZU15 432 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 C14orf80Q86SX3 495 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 LRRC49Q8IUZ0 686 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 SCFD1Q8WVM8 642 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 SPDL1Q96EA4 605 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 NACC1Q96RE7 527 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 KCTD10Q9H3F6 313 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 LUC7LQ9NQ29 371 aaKnown RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 FAM207AQ9NSI2 230 aaPredicted RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 TCEAL9Q9UHQ7 104 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 TRAF3IP3Q9Y228 551 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 SIK3Q9Y2K2 1263 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 UBE4BO95155 1302 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 PABPN1LA6NDY0 278 aaKnown RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 CHUKO15111 745 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 EIF3DO15371 548 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 ZEB2O60315 1214 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 N4BP1O75113 896 aaKnown RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 RNF8O76064 485 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 NR2F2P24468 414 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 LMAN1P49257 510 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 VAV2P52735 878 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 KIF5AQ12840 1032 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 ADAM9Q13443 819 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 LCA5Q86VQ0 697 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 SFR1Q86XK3 245 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 SPATS2Q86XZ4 545 aaKnown RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 TPH2Q8IWU9 490 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 ZC3H3Q8IXZ2 948 aaKnown RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 CHCHD4Q8N4Q1 142 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 CYP2W1Q8TAV3 490 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 RPGRIP1Q96KN7 1286 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 FGD4Q96M96 766 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 MPHOSPH6Q99547 160 aaKnown RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.01□□□□□ -0.332e-7■□□□□ 8.2
SNHG20-202ENST00000434411 MXRA8Q9BRK3 442 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 ACBD3Q9H3P7 528 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 TYW1Q9NV66 732 aaKnown RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 COLQQ9Y215 455 aaPredicted RBP13.01□□□□□ -0.33
SNHG20-202ENST00000434411 PCDHGC5Q9Y5F6 944 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 SLC30A1Q9Y6M5 507 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 DUSP10Q9Y6W6 482 aa13.01□□□□□ -0.33
SNHG20-202ENST00000434411 LRRC37A2A6NM11 1700 aa13□□□□□ -0.33
SNHG20-202ENST00000434411 NPHP3-ACAD11A0A0J9YXS1 232 aa13□□□□□ -0.33
SNHG20-202ENST00000434411 LINC00854A0A1B0GVQ3 168 aa13□□□□□ -0.33
SNHG20-202ENST00000434411 SOWAHBA6NEL2 793 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms