RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 DOCK1Q14185 1865 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 SRRM3A6NNA2 597 aaPredicted RBP8.05□□□□□ -1.12
COL17A1-204ENST00000433822 GOLGA8KD6RF30 607 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 NFKBIEO00221 500 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 ZNF185O15231 689 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 POLR3GO15318 223 aaPredicted RBP8.05□□□□□ -1.12
COL17A1-204ENST00000433822 C21orf2O43822 256 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 SHOX2O60902 331 aaPredicted RBP8.05□□□□□ -1.12
COL17A1-204ENST00000433822 MTA2O94776 668 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 SYF2O95926 243 aaKnown RBP8.05□□□□□ -1.12
COL17A1-204ENST00000433822 KRT13P13646 458 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 PLS3P13797 630 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 SLC9A1P19634 815 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 ACTN2P35609 894 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 QARSP47897 775 aaKnown RBP8.05□□□□□ -1.12
COL17A1-204ENST00000433822 RARRES1P49788 294 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 C2orf54Q08AI8 447 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 BFSP1Q12934 665 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 CUL1Q13616 776 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 CTTNQ14247 550 aaKnown RBP8.05□□□□□ -1.12
COL17A1-204ENST00000433822 RPS6KA1Q15418 735 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 DCAF17Q5H9S7 520 aaPredicted RBP8.05□□□□□ -1.12
COL17A1-204ENST00000433822 ODR4Q5SWX8 454 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 NFRKBQ6P4R8 1299 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 MIER3Q7Z3K6 550 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 RHOT2Q8IXI1 618 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 EFCAB13Q8IY85 973 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 SPICE1Q8N0Z3 855 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 DAW1Q8N136 415 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 USP38Q8NB14 1042 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 TPCN2Q8NHX9 752 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 OLIG1Q8TAK6 271 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 MORC4Q8TE76 937 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 SEC14L1Q92503 715 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 GPRASP2Q96D09 838 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 TRIM11Q96F44 468 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 C12orf42Q96LP6 360 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 ACCSQ96QU6 501 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 NAP1L3Q99457 506 aaPredicted RBP8.05□□□□□ -1.12
COL17A1-204ENST00000433822 LRRC1Q9BTT6 524 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 PLVAPQ9BX97 442 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 FAM129AQ9BZQ8 928 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 AGO4Q9HCK5 861 aaKnown RBP8.05□□□□□ -1.12
COL17A1-204ENST00000433822 CCPG1Q9ULG6 757 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 PPP1R9AQ9ULJ8 1098 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 EXOC7Q9UPT5 735 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 STXBP5LQ9Y2K9 1186 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 LOC285556D6RIA3 1793 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 CEP290O15078 2479 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 GOLGA6BA6NDN3 693 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 H0YCG3 227 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 PGRMC1O00264 195 aaKnown RBP8.04□□□□□ -1.12
COL17A1-204ENST00000433822 DDX3XO00571 662 aaKnown RBP eCLIP8.04□□□□□ -1.12
COL17A1-204ENST00000433822 WNT10BO00744 389 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 ATP2A1O14983 1001 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 KIAA0391O15091 583 aaKnown RBP8.04□□□□□ -1.12
COL17A1-204ENST00000433822 HIP1RO75146 1068 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 STAU1O95793 577 aaKnown RBP8.04□□□□□ -1.12
COL17A1-204ENST00000433822 ARP10275 920 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 GZMAP12544 262 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 ITGB5P18084 799 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 NMT1P30419 496 aaKnown RBP8.04□□□□□ -1.12
COL17A1-204ENST00000433822 GTF2H1P32780 548 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 CASP4P49662 377 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 NCKAP1LP55160 1127 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 SOX10P56693 466 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 SNAP25P60880 206 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 MYL7Q01449 175 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 PPATQ06203 517 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 RAD51AP2Q09MP3 1159 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 TKFCQ3LXA3 575 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 TCERG1LQ5VWI1 586 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 CIAPIN1Q6FI81 312 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 ZNF746Q6NUN9 644 aaPredicted RBP8.04□□□□□ -1.12
COL17A1-204ENST00000433822 USP37Q86T82 979 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 LMO3Q8TAP4 145 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 SYTL5Q8TDW5 730 aaPredicted RBP8.04□□□□□ -1.12
COL17A1-204ENST00000433822 AFAP1L1Q8TED9 768 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 PIGOQ8TEQ8 1089 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 HES6Q96HZ4 224 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 CDHR1Q96JP9 859 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 NTPCRQ9BSD7 190 aaKnown RBP8.04□□□□□ -1.12
COL17A1-204ENST00000433822 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.04□□□□□ -1.12
COL17A1-204ENST00000433822 CARD9Q9H257 536 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 KCNH7Q9NS40 1196 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 VPS18Q9P253 973 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 TCEAL9Q9UHQ7 104 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 DMGDHQ9UI17 866 aaKnown RBP8.04□□□□□ -1.12
COL17A1-204ENST00000433822 COQ4Q9Y3A0 265 aa8.04□□□□□ -1.12
COL17A1-204ENST00000433822 NFASCO94856 1347 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 MKI67P46013 3256 aaKnown RBP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 A0A1W2PNR3 127 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 CLRN2A0PK11 232 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 DCDC2BA2VCK2 349 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 ANKRD62A6NC57 917 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 TMEM88BA6NKF7 163 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 MIF4GDA9UHW6 222 aaKnown RBP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 WDR64B1ANS9 1081 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 AGPSO00116 658 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 BUB1O43683 1085 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms