RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 TMUB1Q9BVT8 246 aa10.42□□□□□ -0.74
CDC42-IT1-201ENST00000431803 IRX2Q9BZI1 471 aaPredicted RBP10.42□□□□□ -0.74
CDC42-IT1-201ENST00000431803 PRKD2Q9BZL6 878 aa10.42□□□□□ -0.74
CDC42-IT1-201ENST00000431803 FZD8Q9H461 694 aa10.42□□□□□ -0.74
CDC42-IT1-201ENST00000431803 RXFP1Q9HBX9 757 aa10.42□□□□□ -0.74
CDC42-IT1-201ENST00000431803 CHST7Q9NS84 486 aa10.42□□□□□ -0.74
CDC42-IT1-201ENST00000431803 PRMT7Q9NVM4 692 aaPredicted RBP10.42□□□□□ -0.74
CDC42-IT1-201ENST00000431803 TDRD15B5MCY1 1934 aaKnown RBP10.42□□□□□ -0.74
CDC42-IT1-201ENST00000431803 C2CD2LO14523 706 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 NPTXRO95502 500 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 S1PR4O95977 384 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 ADH1AP07327 375 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 MUTP22033 750 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 TRAPPC10P48553 1259 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 GLUD2P49448 558 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 RBM25P49756 843 aaKnown RBP10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 MRE11P49959 708 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 VCPP55072 806 aaKnown RBP10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 HMGN5P82970 282 aaKnown RBP10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 TCF15Q12870 199 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 GRIK3Q13003 919 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 MAEAQ7L5Y9 396 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 ALYREFQ86V81 257 aaKnown RBP10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 CDR2LQ86X02 465 aaPredicted RBP10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 NOSTRINQ8IVI9 506 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 GPR65Q8IYL9 337 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 ERMNQ8TAM6 284 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 BSNDQ8WZ55 320 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 APOL6Q9BWW8 343 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 RHOBTB2Q9BYZ6 727 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 CCDC113Q9H0I3 377 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 SMOC2Q9H3U7 446 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 MAN1C1Q9NR34 630 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 SSX2IPQ9Y2D8 614 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 C2orf16Q68DN1 1984 aa10.41□□□□□ -0.74
CDC42-IT1-201ENST00000431803 PLXNA3P51805 1871 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 MYO10Q9HD67 2058 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 GLUD1P00367 558 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 C1RP00736 705 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 PDGFBP01127 241 aaPredicted RBP10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 ASGR2P07307 311 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 CYP11B2P19099 503 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 NAMPTP43490 491 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 ZNF174Q15697 407 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 TTC38Q5R3I4 469 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 HAUS3Q68CZ6 603 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 FUT10Q6P4F1 479 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 CCDC149Q6ZUS6 474 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 OTOP3Q7RTS5 596 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 ZBTB8OSQ8IWT0 167 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 C4orf32Q8N8J7 132 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 ZSCAN31Q96LW9 406 aaPredicted RBP10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 COLEC11Q9BWP8 271 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 GPR62Q9BZJ7 368 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 C2orf40Q9H1Z8 148 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 PDZD7Q9H5P4 517 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 SH2B1Q9NRF2 756 aaPredicted RBP10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 KLK14Q9P0G3 267 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 LIMD1Q9UGP4 676 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 ADAM28Q9UKQ2 775 aa10.4□□□□□ -0.74
CDC42-IT1-201ENST00000431803 ZFHX2Q9C0A1 2572 aaPredicted RBP10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 ARHGEF35A5YM69 484 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 RNF223E7ERA6 249 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 ACKR2O00590 384 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PTGESO14684 152 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 N4BP3O15049 544 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 N4BP1O75113 896 aaKnown RBP10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 EDN1P05305 212 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 U2AF2P26368 475 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 AVPR2P30518 371 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PRPF4BQ13523 1007 aaKnown RBP10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 NAB2Q15742 525 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 ECM1Q16610 540 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 MAPK6Q16659 721 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 USP41Q3LFD5 358 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 CYP26C1Q6V0L0 522 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 IGSF22Q8N9C0 903 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 HDAC7Q8WUI4 952 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 ACSF2Q96CM8 615 aaPredicted RBP10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 B3GALT6Q96L58 329 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 SPSB2Q99619 263 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PAAF1Q9BRP4 392 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 FNIP2Q9P278 1114 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 DPP7Q9UHL4 492 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 SLC27A5Q9Y2P5 690 aa10.39□□□□□ -0.75
CDC42-IT1-201ENST00000431803 SF3B1O75533 1304 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 FRYLO94915 3013 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 CCDC195A0A1B0GUA6 201 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 TGM5O43548 720 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 RFPL2O75678 378 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 RECQL4O94761 1208 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PRKCBP05771 671 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 TOB1P50616 345 aaPredicted RBP10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 EFNA5P52803 228 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 CREMQ03060 361 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 TUSC3Q13454 348 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PDIA5Q14554 519 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 HSP90AA2PQ14568 343 aaPredicted RBP10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PPP2R5AQ15172 486 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms