RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 PWP2Q15269 919 aaKnown RBP13.82□□□□□ -0.2
DDX56-204ENST00000431640 PPP2R5EQ16537 467 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 SLC39A4Q6P5W5 647 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 RPUSD2Q8IZ73 545 aaKnown RBP13.82□□□□□ -0.2
DDX56-204ENST00000431640 PPM1KQ8N3J5 372 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 EIF1ADQ8N9N8 165 aaKnown RBP13.82□□□□□ -0.2
DDX56-204ENST00000431640 ZSWIM2Q8NEG5 633 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 SCFD2Q8WU76 684 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 FAM167AQ96KS9 214 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.82□□□□□ -0.29e-8■■■□□ 14.7
DDX56-204ENST00000431640 SUGCTQ9HAC7 445 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 SAGE1Q9NXZ1 904 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 DMGDHQ9UI17 866 aaKnown RBP13.82□□□□□ -0.2
DDX56-204ENST00000431640 TTC7AQ9ULT0 858 aaPredicted RBP13.82□□□□□ -0.2
DDX56-204ENST00000431640 PACSIN2Q9UNF0 486 aaPredicted RBP13.82□□□□□ -0.2
DDX56-204ENST00000431640 GSTTP1A0A1W2PQM5 241 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 FARP2O94887 1054 aaPredicted RBP13.81□□□□□ -0.2
DDX56-204ENST00000431640 FTLP02792 175 aaPredicted RBP13.81□□□□□ -0.2
DDX56-204ENST00000431640 USP8P40818 1118 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 STAT5BP51692 787 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 SOX10P56693 466 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 PRPF4BQ13523 1007 aaKnown RBP13.81□□□□□ -0.2
DDX56-204ENST00000431640 PSMD6Q15008 389 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 SV2AQ7L0J3 742 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 METTL13Q8N6R0 699 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 ZNF296Q8WUU4 475 aaPredicted RBP13.81□□□□□ -0.2
DDX56-204ENST00000431640 PSPC1Q8WXF1 523 aaKnown RBP13.81□□□□□ -0.2
DDX56-204ENST00000431640 FNBP1Q96RU3 617 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 NAP1L3Q99457 506 aaPredicted RBP13.81□□□□□ -0.2
DDX56-204ENST00000431640 GDF3Q9NR23 364 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 PDGFCQ9NRA1 345 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 EHD2Q9NZN4 543 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 BRCA2P51587 3418 aa13.81□□□□□ -0.2
DDX56-204ENST00000431640 ADGRA3Q8IWK6 1321 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 MIF4GDA9UHW6 222 aaKnown RBP13.8□□□□□ -0.2
DDX56-204ENST00000431640 ADCY6O43306 1168 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 GAS2O43903 313 aaKnown RBP13.8□□□□□ -0.2
DDX56-204ENST00000431640 ZMYND10O75800 440 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 CYP2B6P20813 491 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 ABCB4P21439 1286 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 UBA1P22314 1058 aaKnown RBP13.8□□□□□ -0.2
DDX56-204ENST00000431640 DNA2P51530 1060 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 BPIFB4P59827 614 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 GCNT1Q02742 428 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 TARBP2Q15633 366 aaKnown RBP13.8□□□□□ -0.2
DDX56-204ENST00000431640 WDR44Q5JSH3 913 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 METTL7BQ6UX53 244 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 MAMDC4Q6UXC1 1216 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 ZNF771Q7L3S4 317 aaPredicted RBP13.8□□□□□ -0.2
DDX56-204ENST00000431640 TAS1R3Q7RTX0 852 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 ZNF467Q7Z7K2 595 aaPredicted RBP13.8□□□□□ -0.2
DDX56-204ENST00000431640 DPP9Q86TI2 863 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 HELQQ8TDG4 1101 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 HDAC7Q8WUI4 952 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 TCP11Q8WWU5 503 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 DHX38Q92620 1227 aaKnown RBP13.8□□□□□ -0.2
DDX56-204ENST00000431640 SEMA4DQ92854 862 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 CAVIN3Q969G5 261 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 KREMEN1Q96MU8 473 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 APBA2Q99767 749 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 FAM213AQ9BRX8 229 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 AZI2Q9H6S1 392 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 ST7Q9NRC1 585 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 WBP1LQ9NX94 342 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 SMARCAL1Q9NZC9 954 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 AGO2Q9UKV8 859 aaKnown RBP13.8□□□□□ -0.2
DDX56-204ENST00000431640 HPCAL4Q9UM19 191 aa13.8□□□□□ -0.2
DDX56-204ENST00000431640 SORBS3O60504 671 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 BUB1BO60566 1050 aaPredicted RBP13.79□□□□□ -0.2
DDX56-204ENST00000431640 MAFO75444 373 aaPredicted RBP13.79□□□□□ -0.2
DDX56-204ENST00000431640 MTA2O94776 668 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 SGPL1O95470 568 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 DLATP10515 647 aaKnown RBP13.79□□□□□ -0.2
DDX56-204ENST00000431640 GLRA2P23416 452 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 EFNA5P52803 228 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 FCGRTP55899 365 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 SLC7A5Q01650 507 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 PAK2Q13177 524 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 IER5Q5VY09 327 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 ALS2CLQ60I27 953 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 SMYD5Q6GMV2 418 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 C11orf63Q6NUN7 778 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 TAPT1Q6NXT6 567 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 C15orf39Q6ZRI6 1047 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 CCDC26Q8TAB7 109 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 SOCS4Q8WXH5 440 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 TRIB2Q92519 343 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 EXOC4Q96A65 974 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 TMEM143Q96AN5 459 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 RPS6KC1Q96S38 1066 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 KRT12Q99456 494 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 POP1Q99575 1024 aaKnown RBP13.79□□□□□ -0.2
DDX56-204ENST00000431640 THAP2Q9H0W7 228 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 OSGEPQ9NPF4 335 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.79□□□□□ -0.2
DDX56-204ENST00000431640 PSD3Q9NYI0 1048 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 NOCTQ9UK39 431 aaKnown RBP13.79□□□□□ -0.2
DDX56-204ENST00000431640 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.79□□□□□ -0.2
DDX56-204ENST00000431640 LRRIQ4A6NIV6 560 aa13.79□□□□□ -0.2
DDX56-204ENST00000431640 CYP26A1O43174 497 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms