RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 CPA5Q8WXQ8 436 aa7.7□□□□□ -1.18
COL28A1-202ENST00000430711 RMDN2Q96LZ7 410 aa7.7□□□□□ -1.18
COL28A1-202ENST00000430711 CEP89Q96ST8 783 aa7.7□□□□□ -1.18
COL28A1-202ENST00000430711 RANBP17Q9H2T7 1088 aaKnown RBP7.7□□□□□ -1.18
COL28A1-202ENST00000430711 KIF9Q9HAQ2 790 aa7.7□□□□□ -1.18
COL28A1-202ENST00000430711 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.7□□□□□ -1.18
COL28A1-202ENST00000430711 SUGT1Q9Y2Z0 365 aa7.7□□□□□ -1.18
COL28A1-202ENST00000430711 NUMBLQ9Y6R0 609 aa7.7□□□□□ -1.18
COL28A1-202ENST00000430711 ASTN2O75129 1339 aaPredicted RBP7.7□□□□□ -1.18
COL28A1-202ENST00000430711 MROH7Q68CQ1 1323 aa7.7□□□□□ -1.18
COL28A1-202ENST00000430711 PPP1R12BO60237 982 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 RAD17O75943 681 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 EGFRP00533 1210 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 FOSP01100 380 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 EDN1P05305 212 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 POLR2MP0CAP2 368 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 ETS1P14921 441 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 NPR1P16066 1061 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 EIF2AK2P19525 551 aaKnown RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 GJC1P36383 396 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 GSCP56915 257 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 TAS2R40P59535 323 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 ELF3P78545 371 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 KRT17Q04695 432 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 GAD2Q05329 585 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 RNASELQ05823 741 aaKnown RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 ZBTB41Q5SVQ8 909 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 HS2ST1Q7LGA3 356 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 PIGWQ7Z7B1 504 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 TBC1D1Q86TI0 1168 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 CEP57Q86XR8 500 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 PASD1Q8IV76 773 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 PARP9Q8IXQ6 854 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 FAM71AQ8IYT1 594 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 ANKRD42Q8N9B4 389 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 CLEC4DQ8WXI8 215 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 ZNF516Q92618 1163 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 ART4Q93070 314 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 ZNF653Q96CK0 615 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 NAP1L4Q99733 375 aaKnown RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 MKNK1Q9BUB5 465 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 C10orf88Q9H8K7 445 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 GRID1Q9ULK0 1009 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 UMODL1Q5DID0 1318 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 ATRNL1Q5VV63 1379 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 CCT8L1PA6NM43 557 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 RGS16O15492 202 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 GALR2O43603 387 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 UPP2O95045 317 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 VIMP08670 466 aaKnown RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 ZSCAN5DPP0CG00 497 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 FGFR1P11362 822 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 CYP11B1P15538 503 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 RRM1P23921 792 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 GPC5P78333 572 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 SP4Q02446 784 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 MTMR3Q13615 1198 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 RASA3Q14644 834 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 FASTKD3Q14CZ7 662 aaKnown RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 NFIL3Q16649 462 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 SEZ6Q53EL9 994 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 STRIP1Q5VSL9 837 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 TXNRD3NBQ6F5E7 133 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 C11orf63Q6NUN7 778 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 HIBCHQ6NVY1 386 aaPredicted RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 RHBDF2Q6PJF5 856 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 RNF207Q6ZRF8 634 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 TAS1R3Q7RTX0 852 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 HAUS6Q7Z4H7 955 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 CCDC105Q8IYK2 499 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 TCP11Q8WWU5 503 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 STAMBPL1Q96FJ0 436 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 C9orf72Q96LT7 481 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 NACC1Q96RE7 527 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 TAAR1Q96RJ0 339 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 NCAPGQ9BPX3 1015 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 HAPLN2Q9GZV7 340 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 RAB17Q9H0T7 212 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 C12orf65Q9H3J6 166 aaKnown RBP7.69□□□□□ -1.18
COL28A1-202ENST00000430711 PCYOX1Q9UHG3 505 aa7.69□□□□□ -1.18
COL28A1-202ENST00000430711 TMEM120BA0PK00 339 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 TCP11X1B4DZS4 312 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 SPOPO43791 374 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 CLSTN1O94985 981 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 OAS1P00973 400 aaKnown RBP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 SCP2P22307 547 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 FOXN2P32314 431 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 PSEN1P49768 467 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 MXI1P50539 228 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 NCALDP61601 193 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 PPP2R5AQ15172 486 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 LACTB2Q53H82 288 aaPredicted RBP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 GKAP1Q5VSY0 366 aaPredicted RBP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 CAPN12Q6ZSI9 719 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 PODNQ7Z5L7 613 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 ZNF467Q7Z7K2 595 aaPredicted RBP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 ARFGAP2Q8N6H7 521 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 LMBR1Q8WVP7 490 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 PGM2Q96G03 612 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms