RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 CYTH2Q99418 400 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 KLF6Q99612 283 aaPredicted RBP13.42□□□□□ -0.26
CPNE4-201ENST00000429747 KCTD10Q9H3F6 313 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 NRBP2Q9NSY0 501 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 FEM1BQ9UK73 627 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 KDM3BQ7LBC6 1761 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 LMO7Q8WWI1 1683 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 RASSF10A6NK89 507 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 CCND2P30279 289 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 PRKCIP41743 596 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 TNFAIP1Q13829 316 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 COBLL1Q53SF7 1204 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 TTC16Q8NEE8 873 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 SCFD2Q8WU76 684 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 PPARGC1AQ9UBK2 798 aaKnown RBP13.42□□□□□ -0.26
CPNE4-201ENST00000429747 NEU2Q9Y3R4 380 aa13.42□□□□□ -0.26
CPNE4-201ENST00000429747 HAUS5O94927 633 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 SKIP12755 728 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 MAGEA4P43358 317 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 FNTAP49354 379 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 YARSP54577 528 aaKnown RBP13.41□□□□□ -0.26
CPNE4-201ENST00000429747 CDR2Q01850 454 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 MIS18BP1Q6P0N0 1132 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.41□□□□□ -0.26
CPNE4-201ENST00000429747 PAGR1Q9BTK6 254 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 ACP6Q9NPH0 428 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 KCNH7Q9NS40 1196 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 KCND2Q9NZV8 630 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 CAPRIN2Q6IMN6 1127 aaKnown RBP13.41□□□□□ -0.26
CPNE4-201ENST00000429747 ZC3H18Q86VM9 953 aaKnown RBP13.41□□□□□ -0.26
CPNE4-201ENST00000429747 LNX1Q8TBB1 728 aaPredicted RBP13.41□□□□□ -0.26
CPNE4-201ENST00000429747 PPP4R1Q8TF05 950 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 DHX38Q92620 1227 aaKnown RBP13.41□□□□□ -0.26
CPNE4-201ENST00000429747 ZNF668Q96K58 619 aaPredicted RBP13.41□□□□□ -0.26
CPNE4-201ENST00000429747 RPS6KC1Q96S38 1066 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 IL1R1P14778 569 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 CNGA1P29973 690 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 POLE2P56282 527 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 COPS2P61201 443 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 IGBP1P78318 339 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 TMPRSS15P98073 1019 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 MAP7D3Q8IWC1 876 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 ZFPM1Q8IX07 1006 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 PRPF38AQ8NAV1 312 aaKnown RBP13.41□□□□□ -0.26
CPNE4-201ENST00000429747 AGBL1Q96MI9 1066 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 KDM4CQ9H3R0 1056 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 ATP6V0A4Q9HBG4 840 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 NPHS2Q9NP85 383 aa13.41□□□□□ -0.26
CPNE4-201ENST00000429747 RBAKQ9NYW8 714 aaPredicted RBP13.41□□□□□ -0.26
CPNE4-201ENST00000429747 SCAF8Q9UPN6 1271 aaKnown RBP13.41□□□□□ -0.26
CPNE4-201ENST00000429747 TISP43B9A030 160 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 TOM1L1O75674 476 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 STK10O94804 968 aaKnown RBP13.4□□□□□ -0.26
CPNE4-201ENST00000429747 LCA5LO95447 670 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 CPP00450 1065 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 SERPINB6P35237 376 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 SLC1A1P43005 524 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 PDE1BQ01064 536 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 ENOSF1Q7L5Y1 443 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 RHPN2Q8IUC4 686 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.26
CPNE4-201ENST00000429747 KAT5Q92993 513 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 SERPINB12Q96P63 405 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 L3MBTL1Q9Y468 752 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 IQANK1A0A1B0GTG1 560 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 NQO1P15559 274 aaKnown RBP13.4□□□□□ -0.26
CPNE4-201ENST00000429747 MARCKSL1P49006 195 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 QPCTQ16769 361 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 Q4G0T1 1027 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 ARSHQ5FYA8 562 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 ARHGEF19Q8IW93 802 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 TATDN2Q93075 761 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 MXRA8Q9BRK3 442 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 OSBPL1AQ9BXW6 950 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 POLR3FQ9H1D9 316 aaPredicted RBP13.4□□□□□ -0.26
CPNE4-201ENST00000429747 VCX3BQ9H321 246 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 SCOCQ9UIL1 159 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 AGO2Q9UKV8 859 aaKnown RBP13.4□□□□□ -0.26
CPNE4-201ENST00000429747 RIPK2O43353 540 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 SLITRK3O94933 977 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 ANP32DO95626 131 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 RARAP10276 462 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 P4HA1P13674 534 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 CYP11B1P15538 503 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 ARFIP2P53365 341 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 SLC35G1Q2M3R5 365 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 AP1ARQ63HQ0 302 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 OR6B2Q6IFH4 312 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 PPM1NQ8N819 430 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 NEUROG2Q9H2A3 272 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 KCNMB3Q9NPA1 279 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 SEPT10Q9P0V9 454 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 IP6K2Q9UHH9 426 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 HERC5Q9UII4 1024 aaKnown RBP13.4□□□□□ -0.26
CPNE4-201ENST00000429747 TTLL3Q9Y4R7 772 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 USH1CQ9Y6N9 552 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 SETD1AO15047 1707 aaKnown RBP13.4□□□□□ -0.26
CPNE4-201ENST00000429747 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
CPNE4-201ENST00000429747 SYNJ2BP-COX16A0A087WUM0 186 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms