RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 GYPCP04921 128 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 PAEPP09466 180 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 CCNG1P51959 295 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 ZNF200P98182 395 aaPredicted RBP12.29□□□□□ -0.44
CECR3-201ENST00000428828 DPYDQ12882 1025 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 BLMHQ13867 455 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 GIT2Q14161 759 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 TARBP2Q15633 366 aaKnown RBP12.29□□□□□ -0.44
CECR3-201ENST00000428828 LRRC71Q8N4P6 559 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 METTL13Q8N6R0 699 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 NSMCE1Q8WV22 266 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.29□□□□□ -0.44
CECR3-201ENST00000428828 ALS2CR12Q96Q35 445 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 TMEM106CQ9BVX2 250 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 LRRC27Q9C0I9 530 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 CHCHD3Q9NX63 227 aaKnown RBP12.29□□□□□ -0.44
CECR3-201ENST00000428828 C17orf102A2RUQ5 167 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 LRRC10BA6NIK2 292 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 BUB1BO60566 1050 aaPredicted RBP12.29□□□□□ -0.44
CECR3-201ENST00000428828 TBCAO75347 108 aaKnown RBP12.29□□□□□ -0.44
CECR3-201ENST00000428828 ALADP13716 330 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 KLRC1P26715 233 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 ELF3P78545 371 aaPredicted RBP12.29□□□□□ -0.44
CECR3-201ENST00000428828 HIC1Q14526 733 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 ZNF484Q5JVG2 852 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 TEX9Q8N6V9 391 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 JAKMIP2Q96AA8 810 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 TMEM143Q96AN5 459 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 DNAJC19Q96DA6 116 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 C7orf25Q9BPX7 421 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 TSEN34Q9BSV6 310 aaKnown RBP12.29□□□□□ -0.44
CECR3-201ENST00000428828 XPNPEP1Q9NQW7 623 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 STARD7Q9NQZ5 370 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 HAUS2Q9NVX0 235 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 SIP14410 1827 aa12.29□□□□□ -0.44
CECR3-201ENST00000428828 COL1A2P08123 1366 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 GMNCA6NCL1 334 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 FAM13AO94988 1023 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 C22orf31O95567 290 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 RPN1P04843 607 aaKnown RBP12.28□□□□□ -0.44
CECR3-201ENST00000428828 IMPDH2P12268 514 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 CASP14P31944 242 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 CLCN3P51790 818 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 ITGA7Q13683 1181 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 E2F5Q15329 346 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 MTHFD1LQ6UB35 978 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 DIS3LQ8TF46 1054 aaKnown RBP12.28□□□□□ -0.44
CECR3-201ENST00000428828 HPS3Q969F9 1004 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 ATP6V1G3Q96LB4 118 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 PPP1R16BQ96T49 567 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 DHX33Q9H6R0 707 aaKnown RBP12.28□□□□□ -0.44
CECR3-201ENST00000428828 PANK4Q9NVE7 773 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 NOP53Q9NZM5 478 aaKnown RBP12.28□□□□□ -0.44
CECR3-201ENST00000428828 TBC1D7Q9P0N9 293 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 PHF24Q9UPV7 400 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 PCDHGC5Q9Y5F6 944 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 EPN1Q9Y6I3 576 aaPredicted RBP12.28□□□□□ -0.44
CECR3-201ENST00000428828 NRCAMQ92823 1304 aa12.28□□□□□ -0.44
CECR3-201ENST00000428828 TEX33O43247 280 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 TREHO43280 583 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 MAFO75444 373 aaPredicted RBP12.27□□□□□ -0.44
CECR3-201ENST00000428828 CABYRO75952 493 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 NDUFA10O95299 355 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 ATP1A1P05023 1023 aaKnown RBP12.27□□□□□ -0.44
CECR3-201ENST00000428828 RFC5P40937 340 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 GJA8P48165 433 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 KRT83P78385 493 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 PTPN21Q16825 1174 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 MARCH8Q5T0T0 291 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 EFCAB12Q6NXP0 572 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 NFRKBQ6P4R8 1299 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 RBM12BQ8IXT5 1001 aaKnown RBP12.27□□□□□ -0.44
CECR3-201ENST00000428828 EIF1ADQ8N9N8 165 aaKnown RBP12.27□□□□□ -0.44
CECR3-201ENST00000428828 THOC1Q96FV9 657 aaKnown RBP12.27□□□□□ -0.44
CECR3-201ENST00000428828 ZNF668Q96K58 619 aaPredicted RBP12.27□□□□□ -0.44
CECR3-201ENST00000428828 ZIM3Q96PE6 472 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 NUP58Q9BVL2 599 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 SENP6Q9GZR1 1112 aaPredicted RBP12.27□□□□□ -0.44
CECR3-201ENST00000428828 CRISPLD2Q9H0B8 497 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 POLR3FQ9H1D9 316 aaPredicted RBP12.27□□□□□ -0.44
CECR3-201ENST00000428828 RABEP2Q9H5N1 569 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 EXOC1Q9NV70 894 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 KCND2Q9NZV8 630 aa12.27□□□□□ -0.44
CECR3-201ENST00000428828 FRMD3A2A2Y4 597 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 RRN3P2A6NIE6 340 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 TRAPPC3O43617 180 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 KLRC4O43908 158 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 MYL1P05976 194 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 RPSAP08865 295 aaKnown RBP12.27□□□□□ -0.45
CECR3-201ENST00000428828 PAPOLAP51003 745 aaKnown RBP12.27□□□□□ -0.45
CECR3-201ENST00000428828 FXR1P51114 621 aaKnown RBP eCLIP12.27□□□□□ -0.45
CECR3-201ENST00000428828 ATN1P54259 1190 aaPredicted RBP12.27□□□□□ -0.45
CECR3-201ENST00000428828 COASYQ13057 564 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 GDF6Q6KF10 455 aaPredicted RBP12.27□□□□□ -0.45
CECR3-201ENST00000428828 LRIG3Q6UXM1 1119 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 UNC13DQ70J99 1090 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 SFR1Q86XK3 245 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 CCDC65Q8IXS2 484 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 MYCT1Q8N699 235 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 RETREG2Q8NC44 543 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms