RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.58□□□□□ -0.88
HDAC1-202ENST00000428704 SMAP1Q8IYB5 467 aaPredicted RBP9.58□□□□□ -0.88
HDAC1-202ENST00000428704 MLKLQ8NB16 471 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 KIAA1524Q8TCG1 905 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 DNAJB3Q8WWF6 145 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 RIT2Q99578 217 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 FAM117AQ9C073 453 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 UNC45AQ9H3U1 944 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 PARD6AQ9NPB6 346 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 SPTLC3Q9NUV7 552 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 TYW1Q9NV66 732 aaKnown RBP9.58□□□□□ -0.88
HDAC1-202ENST00000428704 IGSF9Q9P2J2 1179 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 IMPACTQ9P2X3 320 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 PCDHB7Q9Y5E2 793 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 PCDHGA2Q9Y5H1 932 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 MAFBQ9Y5Q3 323 aaPredicted RBP9.58□□□□□ -0.88
HDAC1-202ENST00000428704 COL1A2P08123 1366 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 SMIM35A0A1B0GVV1 85 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 WDR64B1ANS9 1081 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 WNT7AO00755 349 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 BACH1O14867 736 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 POLR2DO15514 142 aaKnown RBP9.57□□□□□ -0.88
HDAC1-202ENST00000428704 HOXA2O43364 376 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 HBP1O60381 514 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 GAS7O60861 476 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 CLASP2O75122 1294 aaKnown RBP9.57□□□□□ -0.88
HDAC1-202ENST00000428704 C22orf31O95567 290 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 ERCC5P28715 1186 aaPredicted RBP9.57□□□□□ -0.88
HDAC1-202ENST00000428704 PMLP29590 882 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 LONP1P36776 959 aaKnown RBP9.57□□□□□ -0.88
HDAC1-202ENST00000428704 MRPS6P82932 125 aaKnown RBP9.57□□□□□ -0.88
HDAC1-202ENST00000428704 PAK2Q13177 524 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 MORC3Q14149 939 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 POSTNQ15063 836 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 LRCH2Q5VUJ6 765 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 PHLDB3Q6NSJ2 640 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 MTHFD1LQ6UB35 978 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 TMC5Q6UXY8 1006 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 MAML2Q8IZL2 1156 aaPredicted RBP9.57□□□□□ -0.88
HDAC1-202ENST00000428704 DDX1Q92499 740 aaKnown RBP9.57□□□□□ -0.88
HDAC1-202ENST00000428704 GSDMAQ96QA5 445 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 TEKT3Q9BXF9 490 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 FAM49AQ9H0Q0 323 aaPredicted RBP9.57□□□□□ -0.88
HDAC1-202ENST00000428704 EPC1Q9H2F5 836 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 KCNMB3Q9NPA1 279 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 SPATA6Q9NWH7 488 aaPredicted RBP9.57□□□□□ -0.88
HDAC1-202ENST00000428704 GABBR1Q9UBS5 961 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 SERTAD1Q9UHV2 236 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 DACH1Q9UI36 760 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 FBXO4Q9UKT5 387 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 ZMIZ1Q9ULJ6 1067 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 PCDHA2Q9Y5H9 948 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 PCDHA10Q9Y5I2 948 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.57□□□□□ -0.88
HDAC1-202ENST00000428704 SPEGQ15772 3267 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 MYO10Q9HD67 2058 aa9.57□□□□□ -0.88
HDAC1-202ENST00000428704 TTC3P53804 2025 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 PLXNA4Q9HCM2 1894 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 CCDC194A0A1B0GVG4 234 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 C2orf71A6NGG8 1288 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 M0QZ92 97 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 CHMP2AO43633 222 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 TBC1D4O60343 1298 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 STBD1O95210 358 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 SMC2O95347 1197 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 PSAPP07602 524 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 TGM1P22735 817 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 PPM1AP35813 382 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 SHC2P98077 582 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 MYL5Q02045 173 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 KCNC4Q03721 635 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 CSTF1Q05048 431 aaKnown RBP9.56□□□□□ -0.88
HDAC1-202ENST00000428704 SPEM2Q0P670 501 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 TMEM62Q0P6H9 643 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 PNOCQ13519 176 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 NOLC1Q14978 699 aaKnown RBP eCLIP9.56□□□□□ -0.88
HDAC1-202ENST00000428704 ZNF174Q15697 407 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 LETM2Q2VYF4 491 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 ZNF484Q5JVG2 852 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 IER5Q5VY09 327 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 PPP4R3AQ6IN85 833 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 PIK3AP1Q6ZUJ8 805 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 CCDC186Q7Z3E2 898 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 NEK8Q86SG6 692 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 CABP7Q86V35 215 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 AOPEPQ8N6M6 819 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 LINC01465Q8N7H1 131 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 MRPL43Q8N983 215 aaKnown RBP9.56□□□□□ -0.88
HDAC1-202ENST00000428704 IQUBQ8NA54 791 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 PJA1Q8NG27 643 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 ENOX1Q8TC92 643 aaKnown RBP9.56□□□□□ -0.88
HDAC1-202ENST00000428704 GPR152Q8TDT2 470 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 RSAD2Q8WXG1 361 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 HAS1Q92839 578 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 ERCC4Q92889 916 aaPredicted RBP9.56□□□□□ -0.88
HDAC1-202ENST00000428704 CCSER1Q9C0I3 900 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 TTC12Q9H892 705 aaPredicted RBP9.56□□□□□ -0.88
HDAC1-202ENST00000428704 ARHGEF3Q9NR81 526 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 DISC1Q9NRI5 854 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 DDX25Q9UHL0 483 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms